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Submitted SNP(ss) Details: ss8340291           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011387.8_13520843
RefSNP(rs#)rs6033768
Submitted Batch IDCHR1_NA17019
Submitted DateNov 14, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA17019
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:1SNP2-173c08.q1kposition:398quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8340291|allelePos=2000|len=4000|taxid=9606|alleles='C/T'|mol=Genomic
 GAACCAAAAA AAGAGCCTGC ATTGCCAAGA CAATCCTAAG CAAAAAGAAC AAAGCTGGAG
 GCATCATGCT ACCTGACTTC AAACTATACT ACAAGGCTAC AGTAACCAAA ACAGCATAGT
 ACTGGTACCA AAACAGATAT ATAGACCAAT GGAACAGAAC AGAGGCCTCA GAAATAACAC
 TACACATCTA CAACCATCTG ATCTTTGACA AAACTGACAA AAACAAGAAA TGGGGAAATG
 ATTCCCTATT TAATAAATGG TGCTGGGAAA ACTGGCTAGC CTTATGTAGA AAGCTGAAAC
 TGGATCCCTT CCTTACACCT TATATAAAAA TTAATTCAAG ATGGATTAAA GACTTAAATG
 TTAGACCTAA AACCATAAAA ACCCTAGAAG AAAACCTAGG CAATACCATT CAGGACACAG
 GCAGGGGCAA AGACTTCATA ACTAAAACAC CAAAAGCAAT GGCAACAAAA GCCAAAATAG
 ACAAATGGGA TCTAATTAAA CTAAAGAGCT TCTGCACAGC AAAAAGAAAC TACCATCAGA
 GTGAACAGGC AACCTACAGA ATGGGAGAAA ATTTTTGCAA TCTACTCATC TGACAAAGGG
 CTAATATCCA GAATCTGCAA AGAACTTAAA TAAATTTACA AGAAAAAAAC CCCATCAAAA
 AGTAGGCAAA GGATATGAAC AGACACTTCT CAATAGAAGA CATTTATGCA GCCAACAGAC
 ACATGAAAAA ATGCTCATCA TCACTGCTCA TCAGAGAAAT GAAAATCAAA ACCACAATGA
 GATACCATCT CACACCAATT AGAACGGCGA TCATTAAAAA TTCAGGAAAC AACAGATGCT
 GGAGAGGATG TGGAGAAATA AGAACGCTTT TACACTGTTG GTGGGAGTGT AAATTAGTTC
 AACCATTGTG GAAGACAATG TGGCAATTCC TCAAGGATCT AGAACTAGAA AGACCATTTG
 ACCCAGCGAT CCCATTACTG GGTATATGCC CAAAAGATTA TAAATAATGC TACTATAAAG
 ACACATGCAC ACATACGTTT ATTTCAGCAC TATTCACAAT AGCAAAGACT TGGAACCAAC
 CTAAACATCC ATCAATGATA GACTGGATTA AGAAATGTGG CACATATACA CCATGGAATT
 CTATGCAGCC ATAAAAAAGG ATGAGTTCAT GTCCTTTGCA GGGACATGGA AGAAGCTGGA
 AACCATCATT CTCAGCAAAC TATCACGAGG ACAGAAAACC AAACACCGCA TGTTCTCACT
 CATAGATGGG AACTGAATAA TGAAAACACT TGGACACAGG GCGGAGAACA TCACACACCA
 GGGCCTGTCA GGCGGTGGGG GGCTGGGGGA GGGATAGCAT TAGGAGAAAT ACCTAATGTA
 AATGACGAGT TGATGGGTGC AGCAAACCAA CATGGCACAT GTGTAGCTAT GTAACAAACC
 TGCACGTCGT GTACATCTAC CCTAGAACTT AAAGTATAAT TTTAAAAAAA AATCAATGTA
 ATTCACCATA TTAAGAGAAA AAGGAAAAAA CCATATGATC ATCTCAGTAG ATACAGATAA
 AGAGGCTAAC TAAATCCAAC ATCCATTCGT GATTTAAAAA AAAAAAAAAG ATCCTGGAAA
 ACAAGGAATA GAAGGGAACT TTCTCAACCT TCTCAACCAC ATAAAAACTT ATTTATGAAA
 AACAAATAGT TATTCCTATA TTTGTCTATA TTTTAAAAAC AAGCCAAGTG AACCACTGAG
 TTAGTAAGCT CATAGGATAC AAGATCAATA TATAAACAAA AACTTTTTCT ATATAGTAGT
 AATAAACTAT TGGAAATTAA ATGTTTTTAA TATCAATTAT CATAGCATCA AAACATGAAA
 TACTTGGGAA TAAACATAAT ACATACAAGA TCTGTACACT GGAAACCACA AAATAATCTT
 GAGAGATATT TTTTAAATCC AATAAATGGA AAGAAATACT ATGTTCATGA ACTGGAAAAT
 TCAGTATTAT TAAATTGAT
 Y
 AACAGGTTCA ACACAATCCC AATATAAATT CCGGCAGTCT TTCTCTTCTT GTAAAGATTG
 ACAAGTTGGT TTTAAAATAC TTATGTAAAT GCAAAGGAAC TAGAATAGCA AAGAAATCTT
 GAAAAGAAAT TTAGGGACTC ACATTGCCTG ATTTCAAGAT TTCAAGAGTG TGGTATTGAC
 ATAAATTTAG ATATATAGAT GAAAGAGATG GAATAGAGTT CAGAAATAGA CACACAGAGA
 AATGGTCAAT TTTTGCCAAA GGTGGCAAGG CAATTCAATG GAGAAAGAAT AACATTTTCA
 AGAAACTGTA CTAGAAAAAT ATACAAAGGA AATAAAAGAT ATTTACCTCA CACTAGAATT
 CAGGAAAAAT TGTTTTTGAA AAGGACCATA CACCTACATG TAGGGGTTAA AACTATAAAC
 ACTGTAAAAG AAAAAACAGG ATAAAGTATT GTGACCTTAC ATTAGGCAAG TATTTCTTAC
 ACAGAAAAAC ATATATTATA CAAGAAAAAA TAATTGAATT TTATCACTTT ACTGTTCAAA
 AGCAATTAAA AAAAGCAAGC CATTATACAT ATACATATGT GTATGTATAT GCACACATAC
 ATACATACAT AGGTTAGTAC AAAAACATGT ATATCCTTGC TCTGTCAGCT GAGAGGCCCT
 ATAAACAATG ATACTCCAAC GAGCACATCT AGGAACCAAG CTTTGGATTC AAATACTATT
 CTCCAATAAG GTAACCAGTA TTCCTTGGAG AAATGGCTGA TTCTAGGACT GAGGCAAGAA
 ATGTACAAGG TAAGCCTGGC CGGGTGTGGT GGCTCACGCC TGTAATCCCA ACCCTCTGGG
 AGGCCCAGAC AGGAGAATCA CTTGAGCTCA GGAGTTCGAG ACCAGCCTGG GCAACACAGC
 GAAACTCCAT CTCTAAAAAA TAAAATACAA AAATTAGCCA GGTGTGATGG CAGGCACCTG
 TAGTCCCAGC TATTGAGCGG CTGAAGTGGG AGGATGGCTT GAGCCTGGGA GGCTGAGGTT
 GCAGTGAGCT GTGATCATGC CACTGCACTC CACCAGCCTG GGCAACACAG TGAGACAGCA
 ACTGTCTCAA AAAAAAAAAA TGAGCCTGGA GCATCTTATA CTACCAGAAA GGAAGTGTTC
 AAAAATAAAA AAAAGAAATC ATAATGATGG GGATATATCA AAGGGCCACA AGGGCCAACT
 GAAAGAGCTC CCAATGGCCA AAGCAGAAAC AATTTGAGCA ACAAAATAAA TAAAGCAGTA
 TTAGACTACA ACTAAAAGGA TAAAATGTAA ATATCCATGA GTCCATACTG ATATAAATTC
 ATTACTGAAT GAATAAATAC ATAAATAAAT AGGAGGAAAA AGAAAATTTT TGCAAAAGAA
 TTCCAAAAAT ATTAGTTACT CCATGCTCAA GAAGGTGAAG CAAAACTCCC CACTCCTTAA
 GTGTGAGGTA CCTATACTGA CTTCCTTCTG AAGAATACAG TATATGTGTA GAGGGAAAAA
 AGAATACCTT TAGAGTGGAA AAACCCAGCA AACACTACAC TGTGTAAGGC ATGTGATACA
 AGTCAACATC AACAGCGATA AGTCATGGTC ATAATATGTA CCCTTGATAT CGTATGATGA
 GAATGACAAT TTATCTCTAA GGTCTTCCAC CTAAAAACCC ATAACCCCAT TCTTTTTTTT
 TTTTTTTTTT TTTTTTTTGA GACAGAGTCT CGCTCAGTTG CCCAGGCTGG AGTGCAGTGG
 CTCGATCTCC ACTCACTGCA AGCTCCGCCT CCTGGGTTCA CGCCATTCTC CTGCCTCAGC
 CTCCCGAGTA GCTGGGACTA CAGGTACCCG CCACCATGCC CAGCTAATTT TTTTGTATTT
 TTTTAGTAGA GATGGGGTTT CACTGTGTTA GCCAGGATGG TCGTGATCTC CTGACCTCGT
 GATCTGCCCT CCTCAGTCTC CCAAAGTGCT GGGATTACAG GCGTGAGCCA CCGCACCCGG
 CCACCCATAA CCCCATTCTA

  Submitted Frequency for ss8340291 back to top
There is no frequency submission for ss8340291.


  dbSNP summary of Genotypes for ss8340291 back to top
No sufficient data to compute Hardy-weinberg probability for ss8340291.


  Submitted individual genotype for ss8340291 back to top
There is no individual genotype data for ss8340291.

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