Submitter | Handle | SC_SNP | Submitter SNP ID | NT_011387.8_13520843 | RefSNP(rs#) | rs6033768 | Submitted Batch ID | CHR1_NA17019 | Submitted Date | Nov 14, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_011387
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR1_NA17019 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:1SNP2-173c08.q1kposition:398quality:51 |
>gnl|dbSNP|ss8340291|allelePos=2000|len=4000|taxid=9606|alleles='C/T'|mol=Genomic GAACCAAAAA AAGAGCCTGC ATTGCCAAGA CAATCCTAAG CAAAAAGAAC AAAGCTGGAG
GCATCATGCT ACCTGACTTC AAACTATACT ACAAGGCTAC AGTAACCAAA ACAGCATAGT
ACTGGTACCA AAACAGATAT ATAGACCAAT GGAACAGAAC AGAGGCCTCA GAAATAACAC
TACACATCTA CAACCATCTG ATCTTTGACA AAACTGACAA AAACAAGAAA TGGGGAAATG
ATTCCCTATT TAATAAATGG TGCTGGGAAA ACTGGCTAGC CTTATGTAGA AAGCTGAAAC
TGGATCCCTT CCTTACACCT TATATAAAAA TTAATTCAAG ATGGATTAAA GACTTAAATG
TTAGACCTAA AACCATAAAA ACCCTAGAAG AAAACCTAGG CAATACCATT CAGGACACAG
GCAGGGGCAA AGACTTCATA ACTAAAACAC CAAAAGCAAT GGCAACAAAA GCCAAAATAG
ACAAATGGGA TCTAATTAAA CTAAAGAGCT TCTGCACAGC AAAAAGAAAC TACCATCAGA
GTGAACAGGC AACCTACAGA ATGGGAGAAA ATTTTTGCAA TCTACTCATC TGACAAAGGG
CTAATATCCA GAATCTGCAA AGAACTTAAA TAAATTTACA AGAAAAAAAC CCCATCAAAA
AGTAGGCAAA GGATATGAAC AGACACTTCT CAATAGAAGA CATTTATGCA GCCAACAGAC
ACATGAAAAA ATGCTCATCA TCACTGCTCA TCAGAGAAAT GAAAATCAAA ACCACAATGA
GATACCATCT CACACCAATT AGAACGGCGA TCATTAAAAA TTCAGGAAAC AACAGATGCT
GGAGAGGATG TGGAGAAATA AGAACGCTTT TACACTGTTG GTGGGAGTGT AAATTAGTTC
AACCATTGTG GAAGACAATG TGGCAATTCC TCAAGGATCT AGAACTAGAA AGACCATTTG
ACCCAGCGAT CCCATTACTG GGTATATGCC CAAAAGATTA TAAATAATGC TACTATAAAG
ACACATGCAC ACATACGTTT ATTTCAGCAC TATTCACAAT AGCAAAGACT TGGAACCAAC
CTAAACATCC ATCAATGATA GACTGGATTA AGAAATGTGG CACATATACA CCATGGAATT
CTATGCAGCC ATAAAAAAGG ATGAGTTCAT GTCCTTTGCA GGGACATGGA AGAAGCTGGA
AACCATCATT CTCAGCAAAC TATCACGAGG ACAGAAAACC AAACACCGCA TGTTCTCACT
CATAGATGGG AACTGAATAA TGAAAACACT TGGACACAGG GCGGAGAACA TCACACACCA
GGGCCTGTCA GGCGGTGGGG GGCTGGGGGA GGGATAGCAT TAGGAGAAAT ACCTAATGTA
AATGACGAGT TGATGGGTGC AGCAAACCAA CATGGCACAT GTGTAGCTAT GTAACAAACC
TGCACGTCGT GTACATCTAC CCTAGAACTT AAAGTATAAT TTTAAAAAAA AATCAATGTA
ATTCACCATA TTAAGAGAAA AAGGAAAAAA CCATATGATC ATCTCAGTAG ATACAGATAA
AGAGGCTAAC TAAATCCAAC ATCCATTCGT GATTTAAAAA AAAAAAAAAG ATCCTGGAAA
ACAAGGAATA GAAGGGAACT TTCTCAACCT TCTCAACCAC ATAAAAACTT ATTTATGAAA
AACAAATAGT TATTCCTATA TTTGTCTATA TTTTAAAAAC AAGCCAAGTG AACCACTGAG
TTAGTAAGCT CATAGGATAC AAGATCAATA TATAAACAAA AACTTTTTCT ATATAGTAGT
AATAAACTAT TGGAAATTAA ATGTTTTTAA TATCAATTAT CATAGCATCA AAACATGAAA
TACTTGGGAA TAAACATAAT ACATACAAGA TCTGTACACT GGAAACCACA AAATAATCTT
GAGAGATATT TTTTAAATCC AATAAATGGA AAGAAATACT ATGTTCATGA ACTGGAAAAT
TCAGTATTAT TAAATTGAT
Y
AACAGGTTCA ACACAATCCC AATATAAATT CCGGCAGTCT TTCTCTTCTT GTAAAGATTG
ACAAGTTGGT TTTAAAATAC TTATGTAAAT GCAAAGGAAC TAGAATAGCA AAGAAATCTT
GAAAAGAAAT TTAGGGACTC ACATTGCCTG ATTTCAAGAT TTCAAGAGTG TGGTATTGAC
ATAAATTTAG ATATATAGAT GAAAGAGATG GAATAGAGTT CAGAAATAGA CACACAGAGA
AATGGTCAAT TTTTGCCAAA GGTGGCAAGG CAATTCAATG GAGAAAGAAT AACATTTTCA
AGAAACTGTA CTAGAAAAAT ATACAAAGGA AATAAAAGAT ATTTACCTCA CACTAGAATT
CAGGAAAAAT TGTTTTTGAA AAGGACCATA CACCTACATG TAGGGGTTAA AACTATAAAC
ACTGTAAAAG AAAAAACAGG ATAAAGTATT GTGACCTTAC ATTAGGCAAG TATTTCTTAC
ACAGAAAAAC ATATATTATA CAAGAAAAAA TAATTGAATT TTATCACTTT ACTGTTCAAA
AGCAATTAAA AAAAGCAAGC CATTATACAT ATACATATGT GTATGTATAT GCACACATAC
ATACATACAT AGGTTAGTAC AAAAACATGT ATATCCTTGC TCTGTCAGCT GAGAGGCCCT
ATAAACAATG ATACTCCAAC GAGCACATCT AGGAACCAAG CTTTGGATTC AAATACTATT
CTCCAATAAG GTAACCAGTA TTCCTTGGAG AAATGGCTGA TTCTAGGACT GAGGCAAGAA
ATGTACAAGG TAAGCCTGGC CGGGTGTGGT GGCTCACGCC TGTAATCCCA ACCCTCTGGG
AGGCCCAGAC AGGAGAATCA CTTGAGCTCA GGAGTTCGAG ACCAGCCTGG GCAACACAGC
GAAACTCCAT CTCTAAAAAA TAAAATACAA AAATTAGCCA GGTGTGATGG CAGGCACCTG
TAGTCCCAGC TATTGAGCGG CTGAAGTGGG AGGATGGCTT GAGCCTGGGA GGCTGAGGTT
GCAGTGAGCT GTGATCATGC CACTGCACTC CACCAGCCTG GGCAACACAG TGAGACAGCA
ACTGTCTCAA AAAAAAAAAA TGAGCCTGGA GCATCTTATA CTACCAGAAA GGAAGTGTTC
AAAAATAAAA AAAAGAAATC ATAATGATGG GGATATATCA AAGGGCCACA AGGGCCAACT
GAAAGAGCTC CCAATGGCCA AAGCAGAAAC AATTTGAGCA ACAAAATAAA TAAAGCAGTA
TTAGACTACA ACTAAAAGGA TAAAATGTAA ATATCCATGA GTCCATACTG ATATAAATTC
ATTACTGAAT GAATAAATAC ATAAATAAAT AGGAGGAAAA AGAAAATTTT TGCAAAAGAA
TTCCAAAAAT ATTAGTTACT CCATGCTCAA GAAGGTGAAG CAAAACTCCC CACTCCTTAA
GTGTGAGGTA CCTATACTGA CTTCCTTCTG AAGAATACAG TATATGTGTA GAGGGAAAAA
AGAATACCTT TAGAGTGGAA AAACCCAGCA AACACTACAC TGTGTAAGGC ATGTGATACA
AGTCAACATC AACAGCGATA AGTCATGGTC ATAATATGTA CCCTTGATAT CGTATGATGA
GAATGACAAT TTATCTCTAA GGTCTTCCAC CTAAAAACCC ATAACCCCAT TCTTTTTTTT
TTTTTTTTTT TTTTTTTTGA GACAGAGTCT CGCTCAGTTG CCCAGGCTGG AGTGCAGTGG
CTCGATCTCC ACTCACTGCA AGCTCCGCCT CCTGGGTTCA CGCCATTCTC CTGCCTCAGC
CTCCCGAGTA GCTGGGACTA CAGGTACCCG CCACCATGCC CAGCTAATTT TTTTGTATTT
TTTTAGTAGA GATGGGGTTT CACTGTGTTA GCCAGGATGG TCGTGATCTC CTGACCTCGT
GATCTGCCCT CCTCAGTCTC CCAAAGTGCT GGGATTACAG GCGTGAGCCA CCGCACCCGG
CCACCCATAA CCCCATTCTA
There is no frequency submission for ss8340291.
No sufficient data to compute Hardy-weinberg probability for ss8340291.
There is no individual genotype data for ss8340291.
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