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Submitted SNP(ss) Details: ss8341478           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011387.8_16703767
RefSNP(rs#)rs6034604
Submitted Batch IDCHR13_NA07340_extra
Submitted DateNov 17, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S6A_2-360f05.p1kposition:-767quality:29

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8341478|allelePos=1579|len=3579|taxid=9606|alleles='T/G'|mol=Genomic
 TTATCTTTTC ATTACATGAG TAAACACATA AACACATTTA AAAAAATAAA TTTTAAAGTT
 TTTTCTTATT CCTTATATTT ATTGTCATTT ATCTTACACA GAAAACTAAT TTGAGCATCA
 TCCCATGATG TCATTCTTTT TCATGGCTGT GTGGTATTCC ATGGTATATA TGTACCACAT
 TTTTTTAAAT GCAGTCCACC ATTGATGGCC TCTAGGTTGA TTCCATGTCT TTGCTATTGT
 GAAAAGTGCT ATGATGAATA CACGCATGTG TGTGTCTTTA AGGTAGAACA ATTTATATTC
 CTTTGGGTAT ACACCTGGTA ATGGGATTGC TGGGTTGAAT GATAACTCCA TTTTAAGTTC
 TTTCAGAAAT TGCCAAGCTG ATTTCTACAG TGGTTGAACT AATTTACACT CTCACCAGTA
 ATGTGTAAGT GCTCCCTTTG CTCTGGAACC TCACTGACAT ATGTTATTTT TTGACTTTTT
 AAAAATACCC ATCCTGGCCT GGCACAGTGG CTCACGCCTG TAATCCCAGC ACTTTGGGAA
 GCTGAGGTGG GTGGATTGCC TAAGGTCAGG AGTTCGAGAC CAGCCTGGCC AACATGGTGA
 AACTCAGTTT CTACTAAAAA TACAAAAAGT TGCCGGGCAT GGTGGTGCAC ACATATAGCT
 ACATCTACTT GGGAGGCTGA GGCAGGAGAA TTGCTTGAAC CTGGGAGGCG GAGGTTGCAG
 TGAGCAGAAG TTGTGCTACT GCACTCCAGC CTGGGTGACA GAGCAAGCCT TTTCTATCTC
 TTGCTTGATT GCTCTGGTTA GTACTTCTAG TACTATATTA ATAGGAGTGG TGAGAGTGGG
 CATCCTCATC CTGTTCTGGT TCTCAAGGGA AATGCTTCCA GGTTTTGCCC ATTCAGTATG
 ATGTTGGCTG TGGGTTTGTC ATAGATAGCT CTTATTATTT TGAGGTACAT TTCTTCAATG
 CCAGTTTGTT GAGGGTTTTT AACATGAACG GATGTTGAAA ACCTTTTCTG TGTCTATTGA
 GATGTGCTTT TTGTTTTAAG TTCTGTTTAT AGGATGAATC ACATTTATTG AGTTGCATAT
 GTTGAACCGA CCTTGCATAC CAGGAATAAA GCCTACTTGA TTGCACTGGA TTAGCTTTTT
 GATGTGCTGC TGGATTCAAT TTGCTAGTAT TTCACTGCAT CTATGTTCTT CATGGGTATT
 AGCTTGAAGT TTTCTTTATT TGTGGTCTCT GCCAGGTTTT GATATCAGAA TGATGTTGGC
 TCATAGAATG AATTAGAGAG GAGTCCCTCC TCAATTTTTT GTAATTGTTT CCGTAGAATT
 GATATCAGCT CTTTTATGTA TGTCTGGTAG AATTTGGCTG TGAATTTGTC TGTTCTAGGG
 CTCTTTCTGG TTGGTAGGTT TTTTTATGAC TGACTTGGTT TCAGAACTAG TTATCGGTCT
 TCTCAGGGTT TCCATTTCTT CCTAGCTCAA TCTTGGGAGG TTGTATGTTT CTAGGAATTG
 ATTCATTTCT TCTAGGTTTT CTAGTTTGTG CATAGAAGTG TTTGAATTAG TCTCTGAGAG
 TTTTTATATA TTTCTGTG
 K
 GATCGGTGGT AATGTCATCT TCATCATTTC TGATTGTGTT TACTTGAATT TTCTCATTTT
 TCTTTATTAG TTTAGCTGGT GGTCTAACAG TCTTATTTAT TCTTTTAATG AACAAACTTT
 TGGTTTCATT AATCTTTTGT GTGAATTTTC ATGTCTCAGT TTTGTTCAGT TCAGCTCGGA
 TTTTGGTTAT TTCTTTTCTT CTGCTAGCCT CAGGGTTGGT TTGCTCTTGT TTTTTCCAGT
 TCCTCCAGGT GTGATGTTAG GTTTTTAATT CAAGGTCTTT CTAACTTTTC AATGTAGGCA
 TTTAGTGTTA TAAACTTTCC TCTTAACACC ATGTTAGCTT TGTCTTAGAG ATTCTGGCAT
 ATTGTATCTT TGTTTTAATT AGTTTCAAAT AATTTCTTGA CTTCCGCCTT AATTTCATTC
 TTTACCCAAA AGTCACTCAG AAACAAGTTG TTTAATTTTC ATGTAATTGT ATGGTTTTGA
 GAGGTCTTTT TGGTATTTAT TTCTATTTTT ATTGTATTGT GGCCTGAGAG TGTGGCTGGT
 ATGATAATTT CTTTTTTAAT TTGTTGAGTT TTGCTCTATG GCTGAGCATG TGGTCTATGT
 GAGAGTATGT GCCATGTGAA GATGAGAAGA ATTATGTTCT GTTGTTGGGT GGAGTGTTCT
 GTAATTGTCT GCTAAGTTCA TTTGTTTGAG TGTTGAGTTT AGGTCCCAAA TGTCTTTGCT
 TTGTGCCTGA TGATCTGTCT AACATTGTCA GTGGGATGTT TAAGTCTCCT ACTATTGTTA
 TGTAGTTATC TTAGTCTCTT TGTAGGTCTC TAAGAGCTTG TTTTATGAAT CTCAGTGCTC
 CAGTGTTGGG TGCATATATA TTTAGGATAG TTAAATGTTG TTGTTGAATT GAAGCCTTTA
 TCATTATGTA ACGCCCTTCT TTATTTTTTT GATCATTGTT GGTTTAAAGT CTATTTTATT
 TGAAATAAGA ATAGCAACTC CTGCTCTTTT TTATTTTCCA TTTGCTTAAT AGACCTTTCT
 CTGTAGCTTT ACTTTAAGCC TATGGTTGTC ACTGCATGTG AGATGGGTCT CTTTAAGACA
 GCATACAGTT GATTCTTACT TTTATATCCA ACTTGACACT CTGTACATTT AAGTGGGGGC
 ATTCAGCCCA TTTACATTCA AGGTTAATAT TTATATGTGA GGCAGATCTT GTCATTTTGT
 TGTCAACTGG TTGTTATGTA GACTTGATTG TATAGTTGCT TTTTAGTGTC AGTGGGCTAT
 GTACCTAAGT GTGTTTTTGT AATGGCAGGT AATAGTGTTT CATTTCCATG TTTAGCACCA
 CCTTAAGGAG TGCAGGGGTT GCTATTTTTA TTTTAGGCGA AACAGACTTT AAGCCAACAA
 TGGTCATAAA GGACAAAGAA GGGCATTACA TAATGATAGA GGGTTTGATT CCACAAGAAG
 ACCTAACTAT TGTAAGTACA TATGCACCCA ACACTGGAAT ACCCAGATTG CTCCTTAAGT
 TCCGTTACCT CTTGTAAACC AGATCTGGTG GTAAGAAATT ACCTTAATTT ACTTGTCTAG
 AAAGGATTTT ATTTGTTCTT TGCTTATGAA GGTTAGTTTG GCTGGATAGG AAACTCTTGG
 TTGGAATTTT TTTCTTTAAG AATGGTAAAT ATAGGCTTCT AATCTCTCCT GGCTTGTAAG
 GTTTCTGCTG AAAGATCTGC CGTTCACCTG ATGGAATTCC TTTTGTATGT GATCTTTCCC
 TTCTGTCTAG CAGCCTTTAA TATTTTTTTT TTCATGTTGG CCTTGGAGAA TCTGATGACG
 ATATGTCTTG GGGATAGACA TTTTGTATAG TATCTCGCAG GGGTTCTCTG AATTTTCCAA
 ATTTGCATAT CAATCTCCCT AGTAAGATTG GGAAAATTTT CATGGATAAT ATCCTCAAAT
 ATGATTTTCA AAATGCTTGC CCTCTTTTCC TCTCTTTCTG GGATGCCATG CATTGTATGT
 TTGATCTCTT TGCATAATCT

  Submitted Frequency for ss8341478 back to top
There is no frequency submission for ss8341478.


  dbSNP summary of Genotypes for ss8341478 back to top
No sufficient data to compute Hardy-weinberg probability for ss8341478.


  Submitted individual genotype for ss8341478 back to top
There is no individual genotype data for ss8341478.

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