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Submitted SNP(ss) Details: ss8341534           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011387.8_16770072
RefSNP(rs#)rs6034658
Submitted Batch IDCHR6_NA17119_extra
Submitted DateNov 12, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR6_NA17119
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:6S17_2-148d19.p1kposition:-792quality:28

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8341534|allelePos=201|len=551|taxid=9606|alleles='C/A'|mol=Genomic
 TTTCCTACCC TTTTTGCTCA CATTCTTTCT CCATTTTTAT ATGTTATTAC TCCTTTATCA
 ACTTGATATG TAGTAATCAA GAAAATGAGT TCTATCTGTA ATATGTGCTG CCATTTTATT
 CATAGATGAT AATTTGCATT TTGACTTTTT TTTTTCTTTT TTGAAATAGG GTCTCACTCT
 GTTACCCAGG CTGGAGTGTG
 M
 TGGCACCATC TTGGCTCACA GCAGCCTCAA CTCCTGGGCT CAAGTGATCC TTCCACCTCG
 ACCTCCTAAG TAGCTGGGAC TACAGGTGCA CACCACCATG CCTGGCTAAT TTTTGTTTTC
 GTTTTGTTTT TTGTAGAGAT GGGGTTTTGC CACGTTGCCC AAGCTTGTCT CAGACTCCAG
 GACTCAAGCA ATCCATCTCC CTTGGCCTCC CTAAGTGCTG GGATTACAGG CATGACCACT
 CAACCCAGCC TCATTGGGAC TTTTTAAAGA ATATTTTTGT GTTGCTGAAA TTATGATTTT
 TTTTGTGATC TTTTATCTTC CGTCTCTCTT TTTCCTGCCT CTATCCTTCC

  Submitted Frequency for ss8341534 back to top
There is no frequency submission for ss8341534.


  dbSNP summary of Genotypes for ss8341534 back to top
No sufficient data to compute Hardy-weinberg probability for ss8341534.


  Submitted individual genotype for ss8341534 back to top
There is no individual genotype data for ss8341534.

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