Submitter | Handle | SC_SNP | Submitter SNP ID | NT_011387.8_10128428 | RefSNP(rs#) | rs4813920 | Submitted Batch ID | CHR22_NA07340_extra | Submitted Date | Nov 12, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_011387
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR22_NA07340 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | c/t_g |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:22S732-278d04.p1kposition:-491quality:51 |
>gnl|dbSNP|ss8348385|allelePos=2000|len=4000|taxid=9606|alleles='C/T'|mol=Genomic ATGGATATGT GTTTTCAGTT CTCTTGGGTT TATGCCTAGA AGTAGAACTG CTGCATCATA
TGGTAGCTCT GTGTTTAAGT TTCTGAGGAA CTGCAAAAAT GTTTCCAAAG TGGCTACACC
ATCTTATACC TTACCAACAA TAGATAAGTG TTATATATTC TCCACATCTT TACCAACACT
TGCTATTTTT CATCTTTTAG ATTAGAGATA TCTTGGGGAT GTGAAGCAGT ATCTCCTTGT
GGTTTTGATT TGCATTTCCC TAATGACTGA TCATGTCAAG CATTTTTCAT GTGTTTATTA
GCCATTTGTA ATCTGCTTTA GAAAAATAAT TCTTAAATTT TTTTCTCATT TTTAAGTTGT
GTTGTCTTTT TATTGAGTTG TAAAGGTCCT TTAAATACTC TGCATAGAAG TCCTTTATCA
GATATATGAT CTGCAAATAT TATTTTCCTT TTTGCTTTTT GCCTTTTCAT TTGTAAAATT
GTATCTTTAG AAACACATTT AACTTTTTTT TATTTTGAGG AAGTCAAATT TATAATTTGC
TGTCATTTGT ATTTTGGTGT TCAATGCCTG ATCCAGGGTC ATAAAAATGT GCACATATGT
TTTATGCTAA GATTTTTATA GTTTTAGCTC TTAAGGTTTT GATCAATTTT GAGTTAATTT
TTTTCTATGA TATGAGGAAC TGGGCCAACC TCATTCTTTT GCAAATGAAC CTCATTCTTT
TGCATATTTT GCAGTTTTCT GAGCATCATT TGTTGAAAAT ACTGCCCTTT CCCCATTGGT
CTTGGAGCCT TTGTCAAAAA TGATTTGACC ATACTATATG CAAGCATTTA TTTCTGGACC
CTCTATTCTA TTCCATTGGT CTGACTTTAT GCCAATACTA CACTGCCTTG ATTATGAAGC
TTCATTGTAA GTTTTGAAAT CAGGAAATCT GAAACTGCAA CTTTATTCTT CTTTTTCAAT
ATCATTTTGG TTATTTAGAA TCCCTTGAGA TTCTATATGA ATTTTAGAGG GATTTTTCTA
TTTCTGAAAA AAAATGTCAA TGAGATTTTG ATAGGAATTG CATTGAACCT ATAGATCACT
TCGGGTAAGT TAGTTTTTCT ATATGGTGTG AGAAACAGAT ACGCCATTTT TTTGCATGTG
GATATCCAAT TCTTGCAGCA CCATTTGTTA AAAATACTAT TTTTTTCCAC ATTGAATTCT
GTTGTCACCC TTGTCAAAAA ATAAATTAAT CATAAATGAA AGGGTTACTT CTGGACATTT
AATCTGATCC CAGTTATTTG TTTTTATGTT GGTGTCGTAA AGTCTTTATT ACTATACCTT
TGTATTAAGT ATGGAAATGC GGAAGTGTGA CTCTTCCAAC TTTGTTCTTC TTTTTCAAGA
TTTTTTGGCT ATTCTGGGTT ACTTGCATTG CTATATAAAT TTTAGAACCA TACTGTTTAT
TTTCCCAAAA ACATTTCTGG GTTTTTCAGT AAAGTTTTTG TTTTGTTTTG TTTTGTTTGT
TTGTTTGGAG ATGATGTCTC GCTATGTTGC CCAGGCTGGG CTTGAACTCC GGGACTCAAG
GGATCCTCCC ACCTCAGCCT CTTGAGTAGC TGAGATTACA AAGGTGAGCC ACTGTGCATA
GCTGGGAAGT ACAATTAATG TGATAAGTTT TTAAAATCTA GTTCAAATTA ATACAAACTT
GATTTTGATA GTACACCAAA ACTTTGCTCT GACATAGCTC TATTCCCTCC TCCCTCCTTG
GTGCTTTTAT TTTCATACAA ATTACATCTG TATACATTAT AAACTCATCA ACATAGTTTT
ACAATTATTG CTTTATGTAA TTTCGATCAG ATAGGAGAAG AAAAAAATAC AAACCAAAAT
AACACAATAA AGCTGGCTTT TATATTTCTC TTTGTACCTA CCTTTACCAG TACTCTTTAT
TGTTTTATGT GGATTTGAGT CACTGTCCAG TCTCTCCATT TCAGCTGAGG CACTTCCTTT
AGTACTTACA GGGAAGGTC
Y
GTTAGCAACA AATTATTTTA GTTATTGTTG CTGTTTTCCT TCCTTTTGAA GGATAATTTT
GTTGAATATA GACTTCTTGG TTGAATGTCT TTTTCTTTCA GTACTTTAAA TATGAGCATG
TCATCCCACT GTCTCTGTGG TTTCTAATGA GAATCTTAAT CTTATTAAGG ATCCCTTGGA
CATAATGAGC CATTTTTCTC TTTCTGCCTT CAGTATTTTC CCTCCATGAC TTTTAGTTTT
GATTGTAATG CACACAGATG TTGATCTCCT TAAGTTATCC TACTGGAGTT TGTTGAGCTT
CTTGGGTGTT TAGATTAATG TTATTCCTCA AAATTTTGTT AGTTTTGGCC ATTACATCTT
CACATGTTCT ATTTACCCAT TTCTCTCATC TCCTTTTGGT TTTCCTTTAT GCTGACTTGG
TATGCTTGAT GATGTCTCAC TGATCTCTGA GGCTTCATTA GCTTTTGTTC ATTCTTTTTC
CATTTTGCTC AGACTGAATC ATCTCAATTG ATTTATCTTT GAAATTGCTT GTTCTTTATT
CTGCCACCTC CAATATGTTA CGGTGCTTCT CTAATGAATT TTTTTATTTC AGTTATGATA
TTTTTCAACT TCGAAATTTT TATTTGATTA TTTACAATAC CTATTTATTT ATTGATATGC
TCTATTTTGT GAGACATCTT TCCCATATTT CCCTTTAGTT CATTGGACAT GGGCTAGTTC
ATTAGTTCTT TAACACATTT ATAAGAGCTG ATTTTAAGTC CTTGTCCAGA AATTCTAATG
CCTAGGTATC CTCAGGGACA GGTTCTCTTG ACTGTTTTTC TCCTGCATAT GGGCCACATT
TGTTTGTATG TCTTAATATT TAGTTAAGAA CTACACATTT TAAATAATAT AATGCGGCAA
TTCTGGAAAT CAGATTTCTA CCTTCATCCC ACAGCATTTG TTACTGTTGC TATTTGTTAC
TACTGTTGTT ACTGTCCCTA GTAACAATTT TTGTCTTAAA TTCTATTTTG CCTGATATCC
ACTTTATCCA ATTCTCTTTG ATTATTTGCA TTGTATATAT ATTTCATCTT TTTTTTTTTC
AATCTATTTG GGGGAGTTTT GTTTGATTGT TGAGTGATTT TGCTGAACTA CTTTGGTAAG
TCTTCTTTAT TGTGTATGGC CCTGAAGTCT CTACTCAGCT AATTTAATGT TCAGCTCATG
TTTGGACAGA GATTTCCCTA AATACCTTGC ACCAATAAGG CTCACAGTCT TTGCTGAGAA
GTTCTGTGTA TGTATTTTTT GGAGTACTCT TTCAATGCTC CACCAGGCAG GTTACAAAGC
TGCCTTAGTC TTTGCTTCCT GATGATGCAG TCTCAGGTTA TGGAGAGGTG AGAGAAGAGG
GCCTTCTCAG ATTTGGGGCA TGCACCCAGC TTTCTGCATG TGCATGGCTT TCTAGATTCC
CAGAAATACG TGAGAACTTT TGAAAACACC CTATGAACAT CTCAGTTTCC AGCATTTCCT
GTTATGATTT TTGGTCAACT TCTTATTTGT CCCAGCTGTT ACCACTGCCT CAGGCAGCTG
CTATGTGAAA CATTTGATGC TGATTGTTTT TGACTAATGC TTTGGGGAGA TAATGTTTAT
ACTATGTGAG TTCTAAGTTA CCTCAAATAA AGATAAGCTT CAAGAGTGGT AGTTTTTAGG
GAACTTTTTA TTTTTTATTT TTACTTTTTT TCTTTCCAAC TTCTATTTAA GATTCAGGGG
GTACCTGTGT AGGTTTGTTG CATGAGTAAA TTGCATGTCA TGGGGGTTTG AGGTATGGAT
TATTTTGTCA CCAAGGTAAT GAGCATTGTA CCCAATAGGT AGTTTTTTGA TCCTCACCTT
CAGGAAATTT TCAGACAAGT TAAATAGTGA CAATTCTCTC TGGATGGGAT TCTGGGGAGC
TCCAAATCAA TTCTGTTACC CTCCAAATGG CATGTAGGTC CCTGGTTTTC AAGGTTGCTA
TAAAGCTGCA GAAAGGGGAA
There is no frequency submission for ss8348385.
No sufficient data to compute Hardy-weinberg probability for ss8348385.
There is no individual genotype data for ss8348385.
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