NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss8349642           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011387.8_11386432
RefSNP(rs#)rs6040708
Submitted Batch IDCHR22_NA07340_extra
Submitted DateNov 12, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:22S732-14i24.p1kposition:668quality:40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8349642|allelePos=2000|len=4000|taxid=9606|alleles='C/T'|mol=Genomic
 TCAATGGTAT TCTTTTGTGT CTGAATTGTT TCATTTAAAA TAATAGCCTC CAGTTCCATC
 CGCATTGCTG CAAAATACAT TATTTCATTC TTGTTATGGC TGAATAGTGT TCTATTGTGT
 ATATAAACCA CATCTTCTTT ATCCAGTCAT CCATTGATGA ACACTTAGGT TGATTCTGTA
 TCTGTGCTAT TGTGAATAGT GTTGAAATAA ACTTACAAAT GCAGGTATGC TTGATATCAT
 AATTTCTTTT CCTTTGCGTA GATACCCAGT AGTGGGATTG CTGAATCAAA TAGTAGTTCT
 ATTTTTAGTC TTTTGAAAAA TATTCATAAT GTTTTCCATA AAGGTTGTAT AATTTACTTT
 TCAACCAATG ATGTATAAAT ATTCCTTTTT CTCTGCACCT TCACCAATAT CTGTTATATT
 TTTTGTCTTT TTAATTATAG CCATCTTGAT TGGTATAAGA TGATATCTGA ATGTGGTTTT
 AACTTGCATT TCTCTGATAA GTTAGTGATG ATGAGCATTG TTTTCATATG TTTGCTGGCC
 ATTGGTATGT CTTCTTTTAA AAAATGTCTA TTCATGTCAC TTGCCCACTC TTTAATGAGA
 TTATTTGTCA TTTTGTTATG TTGTTAAATT GTTTGAGTTC CTTCTAAATT GTGGATATTA
 ATTCCCTGTC AGATGTATAG TTTGCAAATA TTTTCCTGTA TTCTGCAGGT TGTCTGTTTA
 CTCTATCAGT TATTTCTTTT GCTGTGTAAA AGCTTTTTGA GTTTAATTAA CACCCATTTG
 TCTCTTTTTG GTTTTGTTGT CTGAGCCATT AAGATCTTAG TCATAAATTC TTTGCCTAGA
 CCAATATCTG GAAGAGTTTT CCTAGGTTTT CTTCTAAAAA TTTTATAGTT TTATATCTTA
 CGTTTAAGTC TTTAATTCAT CTTGAGTTGA TTTTTTTATA TAGTGAGAAA TAAGAGTCCA
 GTTTCATTCT TCTGCCTTTG GCAATCCAAT TTTCCCGTCA CCTTTTATTG GAAAGAGAGT
 TTTTCCCCAG AGTATGTTCT TGTCAATTTT GTCAAAGATC AGTTGGCTGT AATTGTGTGG
 CTTTATTTCT GGGTTATCTA TTCTGTTTCA GTGATCTATG TTTCTGTTTT TATACCACTA
 TCATGCTGTT TTGATTACTA CAGCCTTGTA GTATAATATG AAGTCAGGGA ATGTCATGCC
 TCCAGCTTTG TTCTTTTTGC TCAGGAGGGC TTTGACTATT CAGGCTCTCC TTTGGTTCCA
 TATGAATTTT AGAATATTTT TTTAAATTTA TACAAAAATG ACATTGGTAT TTTGATAGAA
 ATTGCATTGA ATCTCTAAAT TGCTTTGGGC ACCATGGTCA TTTTAATGAT ACTAATTATT
 CTAACCTATG AGCATGAGAT GTTTTCTCAT TTTTTGTGTC ATCTATATTT TCTTTCAACA
 GTGTTTTGTA GGTTTTTGTA ATTGTAAATA TCTCTCACTC CTGGGTTAAA TATATTCCTA
 TTATTTTATT ATTATTTGTA CCTATTTTAA ATGGGGTTAC CTTCTTGTTT TTGTTATCAG
 CTACATGACT ATTGGTGTAC AGAAAGGCTA TTGAGTTTTG TACATTGATT TTGTATCCTG
 AAACTTTACT GAATTCATTT AGCAAATCTA AGTTTTTTGG TGGAATCTTC AGGGTTTTCT
 AGATATAAGA TCACATCATC GGTGAGTAGA AGTAATCTGA CTTTTCTTTT CCAATTGGGA
 TGCCTTTTAT TTACTTTATC TTGCCTGATT GCTCTGACTA GGACTTCCAG TACTATGTGG
 AATAGGAGAG GTGAAAGTGG GCATTCTTGT ATTGTTTCTG TTTTTAGAGG GAACACAATT
 AACTTTTCCC CATTCAACAT GTTAGTTATG AGTTTGTTAT ACGTGGCCTT TAATATTTTG
 AAATATGTTC CTTCTGTGCC TAGTTTGTTG CAGGTTTTTA CCATAAACTG GTGCTGAATT
 TTATCAGATG CTTTTTCTG
 Y
 ATTTATTGAG ATAATCATAT GGTTTTTGTC TTTAATTCTG TTTATGTGAT GTGTCACATT
 TATAGATTTG TGTATGCTGA ACCATTCTTG CATCTCTGGT ATAAAAACCA TTTCATTGTG
 GCATATTATC ATTTTGAGGT GCTGTTGGAT TCAATTTGCT AGTATTTTGT TGAGGATTTT
 TGCATCTATG TTCATCAGAA ATATTGGTCT GTAGCTTTCT TTTTTGTGGT GTTTTTGTCT
 GGCTGTGGTG TCAGAGTGAT ACTGATCTCA TAGAATGAGT TAGAGACAAT TTCTTCTCAT
 CAATTTTTTA GAACAGTTTT CGCAAACTTG GTATTAGTTT TTCATTCTAT GTTTGGTAGA
 ATTTGGCTGT GAATTCAACT GGTCCTGGGC TTTTGTTTGA GGTGTAGGTA TTTCTTATTA
 CTGATTCAAT CTTGCTGCTT ATTATTAGTC TCCAGCATTT CTATTTCTTT CTGGTTCAAT
 TTTGGGAGAT TGTTTGCTTT CAGCAATTTA TCCATTTCCT CTAGGTTTTC TAGTGTGAGA
 GTATATCGTT CATAATAGTC TCTGATAATC TTTTGTATTT CTGCAGCATC AACTGTAATG
 TCTCCTTTAT TATTTCTACT TTTATTTATT TGGATCTTCT CTCTTCTTTT CTTGGTTAGT
 CTAGCTAGCA GTTTATCAAT TTAATTTGTG TTTTCAAATA ATCAACATTT GCTTCATTGA
 TCCTTTGTAT TTTTTTTTTT TTTTTTTTTT TTTTTTGCCT CTAGTTATCT CCTCTCTGAT
 CTTTGTTATG TCTTCTGCTT CCTTTGGGTT TGGTTTGTCC TTCGTTTTCT AGTTCTTTGA
 GGTGTGATGT TAGGTTGTTA ATTTGTGAGC TTTCTACTTT TTTATTGTAG GCATTTAATG
 CTACAAACTT CCTGTTAGCA CTGCTTTTAC TATATCCCAG AGGTTTTGCT ATGTTGTGTT
 TCCATTTTCA TTCGTTTCCA AATTGTTTTT AGTTTCCATC TTAATTTTTT CATCAGTAAG
 ATCATTCTGA AGCATGTTAA TTCCCATGTA TTTGTATAGT TTTGGAAGTT CCTCTTGGTA
 TTGTTTTGTA GTTTTACTCT GCTCTGATCT GAGAAGATTC TCGATATGAT TTCAATTTTT
 GAAAATTTGT TGAGGCTTAT TTAGTGGCCT CACATATGGT CTGTCTCAAA GAATGTGTTA
 TATGCTGAGA AGAATGTATA TTCTGCAGCT CTTGAGACAA ATGTTCTGTA AATGTCTGAT
 AGGTCCATTT GGTCTAAAGT ACAAATTAAG TCCAGTGTTT TTTTGTTGAT TTTCTGTCTC
 GAAGATCTGT CTACTGCTGT AAGTGGGGTA TTGAAGTCCC CCACTATTAT TGTTTTGTAC
 TCTCTGTCTT TCTTTATGTC TAATATTCGT TTTATTAATC TGGGTGCTTT GGTGTTGGGT
 GCATATATAT TTGGATTGTT ATATCCTCTT GCTGACATTA TCCCTTTATC ATTACATTAT
 GATCTTCATT TTTCTAACTA CTTTTAATTG AAAATTTGCT TTATCTAATA TAAGTATAGT
 TACTCTTGCT CACTTTCGGG TTTCCATTTG CAAGACATAT CTTTTTCTAT CCCTTTACTT
 TTAGTCTATA CGCCTTTACA GGTAAGGTAA GTTTCTTATA AGTAGTATAT AGTTGAATCA
 TTTTTTATCC ATTCCTCCAA TCCATATCCT TTAGGTGAAG TATTTAATCT ATTTATAGTC
 AAGGTTAATA TTGATATATA AGGTTTTGTT CCTGTCATGT TGTTAATTGT TGTCTAGTGG
 TTTTAGACAT TCTTTATTTT TCTGTTTGTC TTTGTGGTTT GGTGGAATTC TGCCATGTTG
 TCATTTGATT CCTTTCTCTT TCTTCTTTGT GTGATTGTTT TATAGGACCT CTGAGTTTTA
 TGCTTTTGTG TGTTTCTATG ATGGTAAATA TCATGCTTTC ATTTCCATGT TTAGGACTCC
 TTTGAACATT TCTTGTAGGG

  Submitted Frequency for ss8349642 back to top
There is no frequency submission for ss8349642.


  dbSNP summary of Genotypes for ss8349642 back to top
No sufficient data to compute Hardy-weinberg probability for ss8349642.


  Submitted individual genotype for ss8349642 back to top
There is no individual genotype data for ss8349642.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement