Submitter | Handle | SC_SNP | Submitter SNP ID | NT_011387.8_11386432 | RefSNP(rs#) | rs6040708 | Submitted Batch ID | CHR22_NA07340_extra | Submitted Date | Nov 12, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_011387
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR22_NA07340 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:22S732-14i24.p1kposition:668quality:40 |
>gnl|dbSNP|ss8349642|allelePos=2000|len=4000|taxid=9606|alleles='C/T'|mol=Genomic TCAATGGTAT TCTTTTGTGT CTGAATTGTT TCATTTAAAA TAATAGCCTC CAGTTCCATC
CGCATTGCTG CAAAATACAT TATTTCATTC TTGTTATGGC TGAATAGTGT TCTATTGTGT
ATATAAACCA CATCTTCTTT ATCCAGTCAT CCATTGATGA ACACTTAGGT TGATTCTGTA
TCTGTGCTAT TGTGAATAGT GTTGAAATAA ACTTACAAAT GCAGGTATGC TTGATATCAT
AATTTCTTTT CCTTTGCGTA GATACCCAGT AGTGGGATTG CTGAATCAAA TAGTAGTTCT
ATTTTTAGTC TTTTGAAAAA TATTCATAAT GTTTTCCATA AAGGTTGTAT AATTTACTTT
TCAACCAATG ATGTATAAAT ATTCCTTTTT CTCTGCACCT TCACCAATAT CTGTTATATT
TTTTGTCTTT TTAATTATAG CCATCTTGAT TGGTATAAGA TGATATCTGA ATGTGGTTTT
AACTTGCATT TCTCTGATAA GTTAGTGATG ATGAGCATTG TTTTCATATG TTTGCTGGCC
ATTGGTATGT CTTCTTTTAA AAAATGTCTA TTCATGTCAC TTGCCCACTC TTTAATGAGA
TTATTTGTCA TTTTGTTATG TTGTTAAATT GTTTGAGTTC CTTCTAAATT GTGGATATTA
ATTCCCTGTC AGATGTATAG TTTGCAAATA TTTTCCTGTA TTCTGCAGGT TGTCTGTTTA
CTCTATCAGT TATTTCTTTT GCTGTGTAAA AGCTTTTTGA GTTTAATTAA CACCCATTTG
TCTCTTTTTG GTTTTGTTGT CTGAGCCATT AAGATCTTAG TCATAAATTC TTTGCCTAGA
CCAATATCTG GAAGAGTTTT CCTAGGTTTT CTTCTAAAAA TTTTATAGTT TTATATCTTA
CGTTTAAGTC TTTAATTCAT CTTGAGTTGA TTTTTTTATA TAGTGAGAAA TAAGAGTCCA
GTTTCATTCT TCTGCCTTTG GCAATCCAAT TTTCCCGTCA CCTTTTATTG GAAAGAGAGT
TTTTCCCCAG AGTATGTTCT TGTCAATTTT GTCAAAGATC AGTTGGCTGT AATTGTGTGG
CTTTATTTCT GGGTTATCTA TTCTGTTTCA GTGATCTATG TTTCTGTTTT TATACCACTA
TCATGCTGTT TTGATTACTA CAGCCTTGTA GTATAATATG AAGTCAGGGA ATGTCATGCC
TCCAGCTTTG TTCTTTTTGC TCAGGAGGGC TTTGACTATT CAGGCTCTCC TTTGGTTCCA
TATGAATTTT AGAATATTTT TTTAAATTTA TACAAAAATG ACATTGGTAT TTTGATAGAA
ATTGCATTGA ATCTCTAAAT TGCTTTGGGC ACCATGGTCA TTTTAATGAT ACTAATTATT
CTAACCTATG AGCATGAGAT GTTTTCTCAT TTTTTGTGTC ATCTATATTT TCTTTCAACA
GTGTTTTGTA GGTTTTTGTA ATTGTAAATA TCTCTCACTC CTGGGTTAAA TATATTCCTA
TTATTTTATT ATTATTTGTA CCTATTTTAA ATGGGGTTAC CTTCTTGTTT TTGTTATCAG
CTACATGACT ATTGGTGTAC AGAAAGGCTA TTGAGTTTTG TACATTGATT TTGTATCCTG
AAACTTTACT GAATTCATTT AGCAAATCTA AGTTTTTTGG TGGAATCTTC AGGGTTTTCT
AGATATAAGA TCACATCATC GGTGAGTAGA AGTAATCTGA CTTTTCTTTT CCAATTGGGA
TGCCTTTTAT TTACTTTATC TTGCCTGATT GCTCTGACTA GGACTTCCAG TACTATGTGG
AATAGGAGAG GTGAAAGTGG GCATTCTTGT ATTGTTTCTG TTTTTAGAGG GAACACAATT
AACTTTTCCC CATTCAACAT GTTAGTTATG AGTTTGTTAT ACGTGGCCTT TAATATTTTG
AAATATGTTC CTTCTGTGCC TAGTTTGTTG CAGGTTTTTA CCATAAACTG GTGCTGAATT
TTATCAGATG CTTTTTCTG
Y
ATTTATTGAG ATAATCATAT GGTTTTTGTC TTTAATTCTG TTTATGTGAT GTGTCACATT
TATAGATTTG TGTATGCTGA ACCATTCTTG CATCTCTGGT ATAAAAACCA TTTCATTGTG
GCATATTATC ATTTTGAGGT GCTGTTGGAT TCAATTTGCT AGTATTTTGT TGAGGATTTT
TGCATCTATG TTCATCAGAA ATATTGGTCT GTAGCTTTCT TTTTTGTGGT GTTTTTGTCT
GGCTGTGGTG TCAGAGTGAT ACTGATCTCA TAGAATGAGT TAGAGACAAT TTCTTCTCAT
CAATTTTTTA GAACAGTTTT CGCAAACTTG GTATTAGTTT TTCATTCTAT GTTTGGTAGA
ATTTGGCTGT GAATTCAACT GGTCCTGGGC TTTTGTTTGA GGTGTAGGTA TTTCTTATTA
CTGATTCAAT CTTGCTGCTT ATTATTAGTC TCCAGCATTT CTATTTCTTT CTGGTTCAAT
TTTGGGAGAT TGTTTGCTTT CAGCAATTTA TCCATTTCCT CTAGGTTTTC TAGTGTGAGA
GTATATCGTT CATAATAGTC TCTGATAATC TTTTGTATTT CTGCAGCATC AACTGTAATG
TCTCCTTTAT TATTTCTACT TTTATTTATT TGGATCTTCT CTCTTCTTTT CTTGGTTAGT
CTAGCTAGCA GTTTATCAAT TTAATTTGTG TTTTCAAATA ATCAACATTT GCTTCATTGA
TCCTTTGTAT TTTTTTTTTT TTTTTTTTTT TTTTTTGCCT CTAGTTATCT CCTCTCTGAT
CTTTGTTATG TCTTCTGCTT CCTTTGGGTT TGGTTTGTCC TTCGTTTTCT AGTTCTTTGA
GGTGTGATGT TAGGTTGTTA ATTTGTGAGC TTTCTACTTT TTTATTGTAG GCATTTAATG
CTACAAACTT CCTGTTAGCA CTGCTTTTAC TATATCCCAG AGGTTTTGCT ATGTTGTGTT
TCCATTTTCA TTCGTTTCCA AATTGTTTTT AGTTTCCATC TTAATTTTTT CATCAGTAAG
ATCATTCTGA AGCATGTTAA TTCCCATGTA TTTGTATAGT TTTGGAAGTT CCTCTTGGTA
TTGTTTTGTA GTTTTACTCT GCTCTGATCT GAGAAGATTC TCGATATGAT TTCAATTTTT
GAAAATTTGT TGAGGCTTAT TTAGTGGCCT CACATATGGT CTGTCTCAAA GAATGTGTTA
TATGCTGAGA AGAATGTATA TTCTGCAGCT CTTGAGACAA ATGTTCTGTA AATGTCTGAT
AGGTCCATTT GGTCTAAAGT ACAAATTAAG TCCAGTGTTT TTTTGTTGAT TTTCTGTCTC
GAAGATCTGT CTACTGCTGT AAGTGGGGTA TTGAAGTCCC CCACTATTAT TGTTTTGTAC
TCTCTGTCTT TCTTTATGTC TAATATTCGT TTTATTAATC TGGGTGCTTT GGTGTTGGGT
GCATATATAT TTGGATTGTT ATATCCTCTT GCTGACATTA TCCCTTTATC ATTACATTAT
GATCTTCATT TTTCTAACTA CTTTTAATTG AAAATTTGCT TTATCTAATA TAAGTATAGT
TACTCTTGCT CACTTTCGGG TTTCCATTTG CAAGACATAT CTTTTTCTAT CCCTTTACTT
TTAGTCTATA CGCCTTTACA GGTAAGGTAA GTTTCTTATA AGTAGTATAT AGTTGAATCA
TTTTTTATCC ATTCCTCCAA TCCATATCCT TTAGGTGAAG TATTTAATCT ATTTATAGTC
AAGGTTAATA TTGATATATA AGGTTTTGTT CCTGTCATGT TGTTAATTGT TGTCTAGTGG
TTTTAGACAT TCTTTATTTT TCTGTTTGTC TTTGTGGTTT GGTGGAATTC TGCCATGTTG
TCATTTGATT CCTTTCTCTT TCTTCTTTGT GTGATTGTTT TATAGGACCT CTGAGTTTTA
TGCTTTTGTG TGTTTCTATG ATGGTAAATA TCATGCTTTC ATTTCCATGT TTAGGACTCC
TTTGAACATT TCTTGTAGGG
There is no frequency submission for ss8349642.
No sufficient data to compute Hardy-weinberg probability for ss8349642.
There is no individual genotype data for ss8349642.
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