| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011387.8_12680262 | | RefSNP(rs#) | rs6041602 | | Submitted Batch ID | CHR1_NA17019 | | Submitted Date | Nov 14, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011387
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_NA17019 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 1 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:1SNP2-303e21.q1kposition:-474quality:51 |
>gnl|dbSNP|ss8350783|allelePos=2000|len=2463|taxid=9606|alleles='C/T'|mol=Genomic TCTATTTTCT CCTCATACCT GATGCATATA CTTTCTGCTT CCCGGCTCCT TCAGCTGTAC
TCACTCTTTG TTGAGTCTCC CACAATTACC ATTGTTCCCG GCCCAGACTT CAATCCGGCC
TCCCACATTA TTCCTGATAC CACACCTGAC CTCCATGACT GTATCTCTCT GATCCACCTG
ACATTCACCC CATTTCCCCA AATTTCCTGG TTTCCCGTTC CTCACCCTGA TCACGCTTGA
TTTATTGATG GCGGTTCCAC CAGGCCTAAT CGCCACACAC CAGCAAAGGC AGGTTATGCT
ATAGTACAAG CCACTAGCCC GCCTCTTAGA ACCTCTCATT TCCTTTCCAT CATGGAAATC
TATCCTCAAG GAAATAACTT CTCAGTGTTC CATTTGCTAT TCTACTACTC CTCAGGGATT
ATTCAGGCCC CCTCCCTTCC CTACACATCA AGCTCGAGGA TTTGCCCCAA CCCAGGACTG
GCAAATTAGC TTTTCTAAAC ATGTCCTGAG TCAGGAAACT AAAATACCTC TTAGTCTAAA
TAGACACTTT CACTGAATAA GTAAAGGCCT TTCCTACAGG GTCTGAGAAG GCCACCACAG
TCATTTCTTC CCTTCTGTCA GGCATAATTC CTCAGTTTAG CCTTCCCACC TCTATACAGT
CTGATAACAG ACCAGCCTTT ATTAGTCAAA TCAGCCGAGC AGTTTTTCAG GCTCTTAGTA
TTCAGTGAAA CCTTTATATC CCTTACGGTC CTCCGTCTTC AAGAAAAGTA GAACGGACTA
AAGGTCTTTT AAAAACACAC CTCACCAAGC TCAGCCACCA ACTTAAAAAG GACTGGACAA
TACTTTTACC ACTTTTGCTT CTCAGAATTC AGGCCTGTCC TCAGAATGCT ACAAGGTACA
TCCCGTTTAA GCTCCTGTAT AGACGCCTTT TTATTAGGCC CCAGTCTCAT TCCAGACACC
AGACCAACTT AGACTGTGCC CCCCCAAAAA AACTTGTCAT CCCTACTATC TTCTGTCTAG
TCATACTCCT ATTCACCGTT CTCAACTACC CATACATGCC CTGCTCTTGT TTACACTGCC
AGTTTACACT GTTTTTCCAA GCCATCACAG CTGATATCTC CTGGTGCTAT CCCCAAACTG
CCACTCTTAA CTCTTGAAGT AAATAAATAA TCTTTGCTGG CAGAACTATG CTGAATCTCC
TTAGGCACTC CCTAATCAGA TATCCTGAGT CATCCCAATT CTTAGACCTT TTACACCTGT
TTTTCTCCTT CTGTTATTCC ATTTAGTTTC TCAATTCATC CAAAACCGTA TCCAGGCCAT
CACCTATCAT TCTATACGAC AAACGTTTCT TCTAACATCC CCACAATATC ACCCCTTACC
ACAAGACCTC CCTTCAGCTT AATCTCTCCC ACTCTAGGTT CCCACGCCGC CCCTAATCCC
GCTTGAAGCA GCCCTTAGAA ACATCGCCCA TTCTCTCTCC ATACCACCCC CCAAAAATTT
TCGCCGCCCC AACATTTCAA CACCATTTTG TTTTATTTTT CTTATTAATA TAAGAAGGCA
GGAATGTCAG GCCTCTGAGC CCAAGCCAAG CCATCGCATC CCCTGTGACT TGCACGCATA
TATAAGCCCA GGTGGCCTGA AGTAACTGAA GAATCACAAA AGAAGTGAAT ATGCCCTGCC
CCACCTTAAC TGATGACATT CCACCACAAA AGAAGTGTAA ATGGCCGGTC CTTGCCTTAA
CTGATGACAT TACCTTGTGA AAGTCCTTTT CCTGGCTCAT CCTGGCTCAA AAAGCACCCC
CACTGAGCAC CTTGCGACCC CCACTCCTGC CTGCCAGAGA ACAAACCCCC TTTGACTGTA
ATTTTCCTTT ACCTACCCAA ATCCTATAAA ACGGCCCCAC CCTTATCTCC CTTCACTGAC
TCTCTTTTCG GACTCAGCCT GCCTGCACCC AGGTGAAATA AACAGCCATG TTGCTCACAC
AAAGCCTGTT TGGTGGTCT
Y
TTCACACGGA CGCACATGAA AGTATCTGTA TGAGTCAGAT TTCATGCTGC TGATAAAGAC
ATACCCGAGA CTGGGAAGAA AAAGAGGTTT AGTTGGACTT ACAGTTCCAC ATGGCTGGGG
AGGTCTCAGA ATCATGGCAG GAGGCAAAAG GCACTTCTTA CATGGTGGCA GCAAGAGAAA
ATGAGGAAGA AGCAAAAGCA GAAACCCCTG ATAAACCCAT CAGATCTCCT GAGCTTTATT
CACTATCACA GGAATGACCA GCCCCCATGA TTCAATTACC TCCCCCTGGT TCCCTCCCAC
AACACGTGGG AATTCTGGGA GATACAATTC AAGTTGAGAT TCGGGTGGAG ATCCAGCCAA
ACCATATCAT TATCTTAATT GACATCAGTG TCCCGGTGGT CTTCTGCCAG TGAATGATAC
CTACTATTAC TAAAGTATGT CCCTCAAAGA TGAGTGCCAT AGC
There is no frequency submission for ss8350783.
No sufficient data to compute Hardy-weinberg probability for ss8350783.
There is no individual genotype data for ss8350783.
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