Submitted SNP(ss) Details: ss8355265

Submitted SNP(ss) Details: ss8355265

Submitter
Handle	SC_SNP
Submitter SNP ID	NT_011387.8_17531393
RefSNP(rs#)	rs6044905
Submitted Batch ID	CHR22_NA10470_extra
Submitted Date	Nov 12, 2003
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Apr 17 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_011387
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR22_NA10470
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 6
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence:22SNP10470-175o16.p1kposition:823quality:34

Fasta sequence (Legend)

 TAGACCTTGT TCAGTGCTGG GGTGAGATTT GAAAGGGCCA AGAAGGAAAG CATTTCTTTT
 GCACTCTGAG CTCTCATCAG ACCCAGCCCT GAAGGAAGTG TAGTGATGGC ATCTGTGGAG
 GGCGTGGAGT GGCTTCTAGA ACAAAACCTC GCTTTCCCCG CACCTGTCCC TCAGGCCTCG
 CTGGCTTCCT GCCTTCACTG
 Y
 ACCGCTTCCG TAGGTGTGGC CTGCAGGCGC AGCATCGTGG TGCCTGTGTG TTCCAGAATA
 TCACATGGAG ACACCTGAGG AAGCTGGTCA GGGCGCAGCT GTCTGTGAGG GGCTTCAGGT
 CTTGTTGTGC TGTCTATGGG CCATGTTAAC CTGGAACTTC ACATCTACTC TGTGGGCTCT
 GATCCATCTT CACCCAGCGG

Submitted Frequency for ss8355265

There is no frequency submission for ss8355265.

dbSNP summary of Genotypes for ss8355265

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
HapMap-YRI	120	120	C=0.92500001	T=0.07500000	C/C=0.85000002 C/T=0.15000001	Pr(chiSq=0.057,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss8355265

There is no individual genotype data for ss8355265.

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