NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss8357164           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011387.8_19654785
RefSNP(rs#)rs6046282
Submitted Batch IDCHR6_NA11321_extra
Submitted DateNov 12, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR6_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S6A_2-523e05.p1kposition:676quality:40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8357164|allelePos=201|len=418|taxid=9606|alleles='G/A'|mol=Genomic
 AAAATGGAGG CACTGAAAAA GCCATGAGGA GCTGAAAACA AGCAGAGTAT TTTGAGAAGC
 CCAGAAAATG TTTCCTAGCC CTTCTCACAC CGTGCGTCAG TGCAGGGCAC GGCACTAAAT
 TCAGGTGGAA GCAGTGATTC CTCACCTTGG GTCCACATTA GAACCACCTA GGATGCATTT
 AAGAATCCCA AGGCCCAGCC
 R
 CCAACCCCCA CCCCATCCCG ATTTGGGTTC TCTGGTGTCT GACACACCCC AGGACCTCAG
 ATTTTGTTTG GGACTCCCAG GTATTTCTGA CATGTATCCA TGGTTCAGAA CCACTGGTTT
 AAGGAAGCAT AATCATACCA TTTGCGATCT TTCATTGTGC AGATTCCTAA AGGAAAGCCC
 TGTGTCCTGC AGGCCTTTGC TACCCAGTGT GAGTGGG

  Submitted Frequency for ss8357164 back to top
There is no frequency submission for ss8357164.


  dbSNP summary of Genotypes for ss8357164 back to top
No sufficient data to compute Hardy-weinberg probability for ss8357164.


  Submitted individual genotype for ss8357164 back to top
There is no individual genotype data for ss8357164.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement