Submitted SNP(ss) Details: ss8367969

Submitted SNP(ss) Details: ss8367969

Submitter
Handle	SC_SNP
Submitter SNP ID	NT_011387.8_6652961
RefSNP(rs#)	rs6054496
Submitted Batch ID	CHR22_NA10470_extra
Submitted Date	Nov 12, 2003
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Apr 17 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_011387
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR22_NA10470
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 4
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence:22SNP10470-331e16.q1kposition:-621quality:56

Fasta sequence (Legend)

 AGGTCAGAGG CAACAGCTGG CCTAGGAGGG CTGCCAGAAT TTCCGGGACA CTGATGCATT
 CAGAATAGGA GAAAAGGGAA CATTGGAGGG GGTGCCTGGC AGGGGGGAAA GGGAGAGGAA
 AGCAGAGGGA GCTCAGAACT GATAAATTCA GATTTGTGTG TTTCACTCAG CCTGAAAACA
 CCAGTGAATC ACTTATGCTA
 R
 TTCGTCTTTT CTCTTTAACA CATTTTCTCC AGTTTGTCTG AAACTATACT GTGTCTACTA
 TGAATAATTT CACACAGTTA CAACACAAAA TTTGTTTTTC TGCCCAAAAA GCAGTCACTT
 GTTCTTGGAC CAGATTCTCC CAATGTGTCC TAAATCAGGG AGATCATTTC TGCCACGGTT
 AAGGCCTTCC CACTGTTTTC

Submitted Frequency for ss8367969

There is no frequency submission for ss8367969.

dbSNP summary of Genotypes for ss8367969

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
HapMap-YRI	120	120	A=0.99166667	G=0.00833333	A/A=0.98333335 A/G=0.01666667	Pr(chiSq=0.000,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss8367969

There is no individual genotype data for ss8367969.

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