| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011333.5_1000955 | | RefSNP(rs#) | rs6062292 | | Submitted Batch ID | 11-APR-2003b | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011333
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA07340 | | Ascertainment Samplesize | 3 | | Population | N.D. |
| | Allele | | Observed Allele | G/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP44340-2067e06.q1cposition:386quality:24sequence:20SNP44340-763e01.q1cposition:199quality:39 |
>gnl|dbSNP|ss8377811|allelePos=401|len=801|taxid=9606|alleles='G/T'|mol=Genomic ctgggcaaca gagtgagact ctgtctcaaa aaataaataa ataaaaagag aaaaaaGTGT
TGCCTGCAgg ccgggcacag tggctcacgc ctgtaatccc aacactttgg gaggccgaga
tgggcagatc acctgaggtc aggagtgcaa gaacagcctg gccaacatgg tgaaacccca
tctctactaa aaatacaaaa gttagctggg tgtgtacatg tagtctcagc tacttgggaa
gctgaggcag gagaatctct tcaaccgggg aggtggaggt tgcgatgagc tgagatcacg
ccaccacact ccatccagcc tgggtgacag agtgagactc catctcaaag caaaaaaaga
aaCATAGGTG GGACCCTTGG TGTGTCCTTA GGGCATGATG
K
TTGAGGTATA CTGCTGGTCC TGTCATGTAA AAGAAAACGA GCCGACTCTG TGTCTACTGG
AGAAAGCACT GCATATATCA GCCACAGTCA ATACCTCGCT TCTGCAGGGA CGGTGGCTGC
CAGAGTGGGA GGCTTTGGTA GCACCCATGT CGTGGAATCA CAATGTTGTC GATAGCTCTG
GGGTCTTGTA CAAAATGCCA GATCCTCCCA TTTGGTTTCC TTATGGGAAG GATCGCAGTA
CTATAATACA TGGGCTTGTG CAAGGGATCA TTATACCCtt ttctcttttt ttgcttttct
ttgagacaga gtttcactct cgtcacccag gctggagtgc aatggcgcga tcttggctca
ctgcaacctc cacctcctgg gttcaagtga ttttcctgGC
There is no frequency submission for ss8377811.
No sufficient data to compute Hardy-weinberg probability for ss8377811.
There is no individual genotype data for ss8377811.
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