| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011333.5_1038884 | | RefSNP(rs#) | rs6062299 | | Submitted Batch ID | 11-APR-2003b | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011333
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA07340 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP44340-1167c07.p1cposition:130quality:40 |
>gnl|dbSNP|ss8377820|allelePos=401|len=801|taxid=9606|alleles='G/C'|mol=Genomic TAGGAGAAGG CAGATTAAAG CCACGGGGAG CCGACACTGT GGTCCCACTG GCATGGCTGA
AATTCAGAAG CCCTGAGTGT GGCATGAGGA TGTGGAACAG CTGGATCTCA TCCATCGCTG
TGAAGTTGTG TAGCCACTCC ACAAACGTGT GGCAAACAGC CGAGCCGGGA GAAGGGAAGA
CGTGTTCAAA GATTCATATG Tggccaggct cagtggctca cgcctgtaat cccagaactt
taggggccaa ggctggggga tcgcttaagc ccaggagttt gagaccagcc taggcaacat
agggagaccc catctcaaaa aaaaaaaaaa agaAAAAAGA AAAGACTTCA GTGTGCAGgt
ttaccagagt tttgtttgca gttgccaaaa ctgggaagca
S
cccgcgtgag cccatccaca ggtgaatgga cagaccgtgg tacCCGAACA CTAACAGCAG
CCACGGGCGT GGACTGTGGT CACACAGCAG CAGGGAGCCG ATGAGTCTCG GACATGCTAA
CCCAGAGAGG CCCATTGAGG AGGACCTACT Gttttttgtg tttttgtttt ttgttttgaa
atggagtctc gctctgtggt gcaggctgga gtgcagtggt gtggtcttgg ctcactgcag
cttccgcctc ttgggttcaa acagttctcc tgcctcagcc ttccgagtag ctgggactac
aggcacccgc caccacaccc ggctaatttt tgtattttca gtagagacgg cagttcgcca
tgttggccag gctggtccca aactcctgac cttgtcatcc
There is no frequency submission for ss8377820.
No sufficient data to compute Hardy-weinberg probability for ss8377820.
There is no individual genotype data for ss8377820.
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