| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011333.5_1047440 | | RefSNP(rs#) | rs6062301 | | Submitted Batch ID | 11-APR-2003b | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011333
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA07340 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 1 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP44340-1332f02.q1cposition:89quality:32 |
>gnl|dbSNP|ss8377823|allelePos=401|len=801|taxid=9606|alleles='T/C'|mol=Genomic GTCCCAGCCA CCACCTCTTT TGGACTCCGG GAGGCCTGGA ACGTTCTGAA CGCTCCGTGG
GGCTCCAGTC TTCTCCGCAG CCAGGGCAGC AGGGTTTGCT GTCTGTCCTG CAGGCAGATG
AGGAGTCAGG GCTGGGGCCT GTGTGGGGGC TCTCCTGAGC GCACAGCCGC CGAGGTGGAG
CGTGTTCTGC CTGAGCGCCG ACCTGGTCGG GGGAATCCCA GTTGCTTCCA GGTGGAGCCA
CTGTCCTCAG CGTAATGCTC AAGGCTCTGG CCTGGCTCCT CGGCCACCCT GCACCCTCAG
GGTCCCCTCC TGTAGCTTCT GCTGCCCCAT CACTGTCACT CTCCAAAGCT TTGGGGACTC
TGCCCAGAGC CACCGCCTCC CAGAAGCCCC TGACAACCTC
Y
TGACGACCCC CTAGTGACCC CATCCCTCCC CTCTGACGGC GGCCCCTGCT CTGAGGCGGC
TTCTTTTCCT CGGTGCTGTT CTCGTGCTGG CCAGGCCTCC TCTCCCCACC TGGAGGCTCC
TGAGGGCGGA GGCCTCTCAC CTCCAATGCT GGCGTCCCCT GGAGGGCTGA ATTTGTTTCC
GAGGGAAGGA AACTTCCACA GTTGTTGCCT TCAGTTCCAA AGCTGCAGCC TGATTTCCCC
CTCCAGGCTC GAGCCTGTTT TCTTCTCGGC AGCTACATCT TTGACCAGTG TCGTCCCCCC
TCAGGCCCGA GCCTGCCTTC TTCTCCTCAG TTCCCAAAGC TGCAGTCTGG TCCCCCCGCC
AGGCTCGAGC CTGCCTTCTT CTCCTCGGCA GCTACATCTT
There is no frequency submission for ss8377823.
No sufficient data to compute Hardy-weinberg probability for ss8377823.
There is no individual genotype data for ss8377823.
| 
