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Submitted SNP(ss) Details: ss8377836           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011333.5_1128472
RefSNP(rs#)rs6062309
Submitted Batch ID11-APR-2003b
Submitted DateApr 17, 2003
Publication Cited[1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP44340-1330h10.p1cposition:430quality:42

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8377836|allelePos=401|len=801|taxid=9606|alleles='A/G'|mol=Genomic
 TTGAAATGCC ACgtcaggct ctgggatcaa gaccatgcca gcttagatag gctggagact
 gttcctttct tctagtattt ggaagatatg tctaacgttg gcgtcatttt cttccgttaa
 aattggaaag aattcactag taaaggcact cgccctgaag ctttctctgt gggaaggctt
 taaagttatt aattcaattt tctcagcaga tcataaaacc attgagctct tcctgtttgc
 tccagttttg ataaattctg ttttccagga attttcccat ttcctccaat gtgtcaaata
 tattcgcata aagttgtgta taataatctT ATCTATCCAA TATCCGTTGA TCACTTTTCA
 CAGGAGTTAT ATCAGTGttt ttgttttttt tttttgagac
 R
 gagtctcact ctgttgccca ggctggagtg cagtggcaca atctcgattc actgcaagct
 ccgcctcctg ggttctcctg cctcagcctc ccgagtagct aggattacag gcgcctgtca
 ccacacctgg ctaatttttt ctatttttag tagagacagg gtttcaccgt gttagccagg
 atggtctcgg atctcctgac ctcgtgatcc gcctgcctcg gcctctcaaa gtgctgggat
 tacaggcgtg agccaccgcg ccaggccGAG TTATATCAGT TTTATTATCT TTTCAACACA
 CTGGCTTTGG GCATTGTTCA Ctttcggttt tggggtttgc ccaggctgga atgcagcagt
 gcaatcatag ctcactgtaa ccttaaactc cttggcCTCA

  Submitted Frequency for ss8377836 back to top
There is no frequency submission for ss8377836.


  dbSNP summary of Genotypes for ss8377836 back to top
No sufficient data to compute Hardy-weinberg probability for ss8377836.


  Submitted individual genotype for ss8377836 back to top
There is no individual genotype data for ss8377836.

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