Submitted SNP(ss) Details: ss8394838

Submitted SNP(ss) Details: ss8394838

Submitter
Handle	SC_SNP
Submitter SNP ID	NT_011387.8_18108353
RefSNP(rs#)	rs8517
Submitted Batch ID	CHR9_12_NA07340.2a
Submitted Date	Nov 14, 2003
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Apr 17 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_011387
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR9_12_NA07340
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	T/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c/t_g

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence:912S-713b18.q1kposition:823quality:34

Fasta sequence (Legend)

 TTGTGGAGAT CTAAAGGCAG TGATTGATTT CACAGGGAGC TCTAATCTCT GTGATTACAT
 GGTCCTTCAA ACTCCCAACC AAAGTGAGAA AAGCGGCATG CAGTGAAATG AGCAGTGAGC
 AGCCCTTTAG CAAAATCGCC CTCCAGTCCT TCCTGGAGAT GCCTTCAGCC AGCATCCCAG
 ACTCCACAGT TATTTATGAA
 Y
 GATGTCGTGA TTCTCCCTCC ACCTGACAGT TTGTAAGAGT GAAAGAGCAT CTAACCTGAT
 GCTCTTGGAG AGAGATAACC TGTCTGTCAT AACTTAAAGG ATGAGAAAAT GTGGTGTAGC
 TATTAAAGAT TCATGCAGTC CCAAAAGGCA CTGTCCTGGG ATGATGAGAG ATTATAAGGT
 GATTTCATAA AAGGAATCCA

Submitted Frequency for ss8394838

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
CEPH - MULTI-NATIONAL	184	T=0.55000001	C=0.44999999	0.495 +/-0.010			1_2004	SEQUENOM

dbSNP summary of Genotypes for ss8394838

No sufficient data to compute Hardy-weinberg probability for ss8394838.

Submitted individual genotype for ss8394838

There is no individual genotype data for ss8394838.

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