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Submitted SNP(ss) Details: ss84075117           
Submitter
HandleHGSV
Submitter SNP IDCor19129_SNV_20070510.chr17_74861827
RefSNP(rs#)rs1542396
Submitted Batch IDNA19129-Fosmids-20070510
Submitted DateDec 06, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 6 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19129-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality99324518 80 5999497385 88 59

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss84075117|allelePos=362|len=716|taxid=9606|alleles='T/C'|mol=Genomic
 CCTGAGGCAC GAGGGGCCCC CACTGGCTTT CTCACCCTTC CCCAGGCGAA CCTTGCACTG
 TCCTGTCCTG CAGATGAGGT GTGCAGTGGG GGCCGCTCCC TGAGGTCCCA CCCCCGCGTT
 ACCCACTTGA CCATCGACCT CCAAGTCCTC TGCATCTCTC TCAGGAGATC TTCCCTTTCA
 CCACCCGACT CTTATTTTTG TTTTTAATAG CCTTAATGTT TTTAGAGAAG TTTTACACTC
 ATAGTGGGAT GGATGGGAAG GTACAGAGAG TTCCCACAGA CCCCCTGCCC TCCCCATGAC
 ATGCACAGTC CCCCACTGTC CACAACCGCC TCCAGAGGGT CCATCAGTTC AATGGGTGAA
 C
 Y
 ATACGGACAA CGTCATTGTC ACCCAGAGTC CAGGGCTCAC AGGAGGATTA GCTGTCAGTG
 TGGTGATCCT GTGGGTTTGG GCAAATGTGT AAAGACGCAG GCCCACCATT CTAGTGTCAT
 GCATGGCGGT GTCACCGCCC TAAAGAGCCT CTGTAGGCAC TGGGGCCACA TCAGTTCTAC
 TCATTGACAA TGACTGGCTC ACTCCAGCTA GCACTGCCGG AGCCTCCCTC TCAGGCAGAC
 TGATGGGGAA ATTTGCTCAT CAACACAAAG GCACTGGGAG CATCTGCCTG GAGCAGGAGA
 GTGAGGACAC CCCAGCCCCC GGCATCTACA GATACTCTCA GTGGTTCCAT AGTT

  Submitted Frequency for ss84075117 back to top
There is no frequency submission for ss84075117.


  dbSNP summary of Genotypes for ss84075117 back to top
No sufficient data to compute Hardy-weinberg probability for ss84075117.


  Submitted individual genotype for ss84075117 back to top
There is no individual genotype data for ss84075117.

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