NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss84075136           
Submitter
HandleHGSV
Submitter SNP IDCor19129_SNV_20070510.chr18_54847868
RefSNP(rs#)rs12954864
Submitted Batch IDNA19129-Fosmids-20070510
Submitted DateDec 06, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 6 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19129-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality99495692 -390 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss84075136|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GTTCTTACTA ATTTTTAAAG TTTATTATGT ATATAAAGAA TATTAATTCT GAGTCATATC
 AGCTGCAGAC ATCTTCCTCA GTATTTTGGT TGCTTTAAGA TTTTAAAAAT AATTATGACA
 AGTTAAGTGA AATCCATTAA TATTTTCCTT TATATTTTTT CTCTTTTTTC ATTAGTTTTA
 TTCTTACAGC ATCATTCTCC
 R
 TCCTTAAAAT TGTTAAAGGT TTTTCTACGT AAGTATGCAG CGGTTTGCTT TTCACAGGCC
 CGTTTTCTCG GCGTCTTGTT TCGGTGTCCT GAGATGAGGG AAGGCACAGC TGTTGTGTCT
 TCTTCCTGCA GGTTCATCAC CTTGCTGGGT CTCATCCTCC CTCCGGCTGG AACAGTCTGC
 GTGGCAGCTA GGGAATGGGG

  Submitted Frequency for ss84075136 back to top
There is no frequency submission for ss84075136.


  dbSNP summary of Genotypes for ss84075136 back to top
No sufficient data to compute Hardy-weinberg probability for ss84075136.


  Submitted individual genotype for ss84075136 back to top
There is no individual genotype data for ss84075136.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement