| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011333.5_1100447 | | RefSNP(rs#) | rs2427532 | | Submitted Batch ID | 11-APR-2003c | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011333
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c_g/a |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 1 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45080-798g03.q1cposition:297quality:56 |
>gnl|dbSNP|ss8413251|allelePos=401|len=801|taxid=9606|alleles='G/A'|mol=Genomic tgtgtatatg catgccatgt gtgtgcatgt atgtgtatat gcatatatga gtgagtgcac
gtGACAGTCT ACACGTGAGG gtgcatgtgt gtgcgcgtgt gggtgactgc atatgtgtgt
gcatgtgtgg gtgcgggtgc atctgtgtgt gcatgtttgg gtgcgggtgc atgtgtgcgt
gcacgtgtgt gtgGATGAGA GGTCGCAtgt gtgtgggtga gggcgtgtgt gtgtgcatgt
gtgtgggtga gggggcatgt gtgtgcacgt gtgtgggtga ggtgtgtgtg tgcatgtgtc
agggtgtgtg tgcgcgcatg tgtgtgggtg agggcctgtg tgtgcgtgtg tgtgggtgag
agatgtgtgc gcatgtgtgt AGGTAAGGgt gcttgtgtgc
R
catgtgtgtg ggtgagggcg tatgtgtgtg ggtgagggca cgtgtgcgcg cgtgtgggtg
agatggcgtg tgcgtatatc catgtatgac tgcatctgta tttgcatgag ttcatgtgtg
agtgcatgtt tatacgcgtg tcagggtctc tgtgtatgtg tatgacgtgt gagtacatgt
gttaatgtgt gtgtacatgt gtatatGCCt gtgtgcatgt gtgtatgcat gtgtatacat
gtgtacttgt gtatgtgtat atgtgtatgt ctgtatatgt gtgtgtatgc ctgtgtacgt
atgtatatgc gtgtgtgtat gcatgtgagt gcatgtttat gcgtgtgtat gtgtacttgt
gtgtgcctgt gtgagtgcat gtgtgtgtAC ATGTGTATAT
There is no frequency submission for ss8413251.
No sufficient data to compute Hardy-weinberg probability for ss8413251.
There is no individual genotype data for ss8413251.
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