| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011333.5_1262964 | | RefSNP(rs#) | rs6089779 | | Submitted Batch ID | 11-APR-2003c | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011333
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP45080-812h11.p1cposition:282quality:25 |
>gnl|dbSNP|ss8413267|allelePos=401|len=801|taxid=9606|alleles='C/T'|mol=Genomic TGATTCCGGG AGGGTGGGAG GGCGCTGGCG ACGGCATTTC AGTGGTTGGA CAGGAAGGAA
GGAAGGACGT CCCATCTCGG CGCTCCAGGG TTGAGCAAAT GTCAGTCCCA GGACGGTGGC
TCCGGGTGGG GGCGGGGGCG ACGGTCCGCA GCCGTCTCCC ACCAGCTCCC TGTTCAGTTC
TTTGATGAGA ACGATTACGT TTTCTCAGTC TTACTTAAAG CGCTGAGTAA ACTCACCTGC
AAGACCAGCA AGCCCTGCGC TTCTCTTTCT GCGCGGTTCC CCGCAGCACA TGGCGTGTCC
ACCCGGGACC CACCTGCGGC CACCTGAAGA CTGGGAGGAC TGGCTCCGCC CCCGCGCTTC
GTCCCCGCCC ACTCATGGGC GGAGCCTCCA CAGGGCGCCT
Y
GGCCCCGGGC TGTCACTCGG GACTCCGCCC CTTCATGGAC GGAGCCTCCG CTCGGCTCTC
TGAGCGCATG CGCAGCCGGT CCCACCCGCG GCTCCGACAC GCCGGAGCCC ACGTCCTTCC
GGGAGCGCGC GCGCCGGTGC GGGTGCGTGC GTGAGCGTGC TCGTCTccgc tgccgctgcc
gctgccgctg ccggtgccgc acccgcgccc tctgccgccg ccgccgccgc cgccCGGGGT
CTCCAGGCTG AGGAGTGCGT CGGCCGCTGC CCAGCAGCGC CGCGAATCGG GGAGCGGAGC
CGCGGAGCCg gcgggagggc gggcgggcgg gcggacgggc aggtgagctc gctgcgggtc
gggcgggcgg ATCGGCCCAC GTCAGGCCCG GGCAGGCGGG
There is no frequency submission for ss8413267.
No sufficient data to compute Hardy-weinberg probability for ss8413267.
There is no individual genotype data for ss8413267.
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