NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss8450605           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011333.5_1071923
RefSNP(rs#)rs1291210
Submitted Batch ID11-APR-2003d
Submitted DateApr 17, 2003
Publication Cited[1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:Chr_20-47841543f11.q1kposition:199quality:44

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8450605|allelePos=401|len=801|taxid=9606|alleles='A/C'|mol=Genomic
 GGCCGCCAAC CCCTCAAGGG ACCCTGCAGT GTGCCGGCTG TCTGCTGCTG ACACAAGGGA
 GCAGGCGGAC CCTAAGGTGG AGACCTCTGT GGCAGGAGGG GCGGCTCTGT GGAGGCTGCA
 GCAAGCCCAG TGAGAGAATC TCCACGTGGC TCCTGGGGCT TCTGAGCAGG GTGGCAGAAG
 GTTCATGTGC AACCGGGTCC TGGACCATGG GACCACGTGG CCAGAGCCAC CCATCACACC
 TACCAGGCAC AAGGTGCACA GCCCAGCAGG GCCGCAGTGG ACGGGAGCGA CACCTCAGGG
 CTGAGTGCGG GCAGGACCCA GAGCCCCACG CCCCAGTGGA GGCGTCACAG CAGTGGTCAT
 TGTGGGGTGC CCCACAAGGA GGGGGAAGAG GGAGGTGTCC
 M
 AGCGTGGCTC CTGGCTGGCC AGCTGACCCC AGTGGAGCAG TCAGAGGGAC TGTGGGTCTG
 AGTTTTTCTC CCCAGCAGCA ATGGGAGCTC CCCAACTGCA AAGTGCCAGC CAGCCTGAGA
 GACTAGTGTT ACAGCAAAGA ACCCAGGAGC TGAGGTCCTG GCACATGCCA CACATGTGGA
 CACCAACCCA GGGTCCAGCC CCAGGACGAG GCCAATTCGC AATGACGCCC CTTTCTGTGG
 TGCTGGCTCT GCACAAGGAT GCAGGATACA GGAAACCAGG GTGGGAGCAG GGGCCTCCCT
 TCCGGTCCCT CCCAGTGACC TAGGGGGGTC CCTGCAGCTG ATCCTCCCAG CTCTGAGCTC
 AGCAGGGTCA GGGGTCCCGG CCACTAGAGC AGCACATACT

  Submitted Frequency for ss8450605 back to top
There is no frequency submission for ss8450605.


  dbSNP summary of Genotypes for ss8450605 back to top
No sufficient data to compute Hardy-weinberg probability for ss8450605.


  Submitted individual genotype for ss8450605 back to top
There is no individual genotype data for ss8450605.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement