| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011333.5_1197120 | | RefSNP(rs#) | rs6122036 | | Submitted Batch ID | 11-APR-2003d | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011333
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA11321 | | Ascertainment Samplesize | 4 | | Population | N.D. |
| | Allele | | Observed Allele | A/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 1 | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:Chr_20-47841307g07.p1kposition:254quality:46sequence:Chr_20-47841681b04.p1kposition:-132quality:40sequence:20SNP45081-109b12.q1cposition:420quality:35 |
>gnl|dbSNP|ss8450619|allelePos=401|len=801|taxid=9606|alleles='A/G'|mol=Genomic TCTCACTTTA ACTCAGCAGT GGAGCGGGTG CCTGGGCACC AGTCACGGCA GTGGGAGGAA
CCGGCTCCAG TTCTCAGGCT GTGGAGCCGT CTAGGCACCG TGCACGAAGT GGGTCTCCAG
GGCTCTGAGA GGCCGGGCTA AGACCTCTGA TGGAGAACAG AGCACTGGAG CTGCACCGCT
GTCCCAGAAA CACAGGCCAC AGGGACAGAG TGGCCCAATT TCCCTTAATT TAAAAACCCC
ACGTCAGGGC AGTGTTGGAA AGTTCACTCT GCTAAAATTT AATTCAGTGT TTGTAAATAG
TACATCGTCT GACAATAACA ACTGTGTACC CCCCACGGCA TTTCCTCTAA ATCCTTGGAG
CAGTTTCACC GTTCACAGGG TTTACCTCCT GACCTCTGTG
R
CCACCAGGGG CTGGGGAGGG ACGGAGGACG CAGGGCACTG GGTCAGCCTG GCCCTGGTGG
AACTGACCTG GGGGCCCTTA GGTAACAGTC CACCCAACCC GAACATCCGA AACAGGAGTG
GAACTCAGGT CTGAGCACAG AACGACTCAT CCTCACACAA AACAGCTAAA CCCGAACAGA
AATCACCTCA TCTAAGCAAA AGAAAACTCT CACGTTCAGG ATAATGCTGT CAGTGAGAGG
CTTAATTAAA TGCTTGTCCC CAGGCTGGCC TGAAGGCAAG GCGGAATTTC GGATTTCTAA
ACACCTCAAA GTGAGTGCAT TCCACGCCCC AAGGAGAAAT CTGACAGTAA CTCCCCAGCC
CTCTTCCTTC AGTTACGGAG AAGATGTCTA GCTTTTTAGG
There is no frequency submission for ss8450619.
No sufficient data to compute Hardy-weinberg probability for ss8450619.
There is no individual genotype data for ss8450619.
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