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Submitted SNP(ss) Details: ss87152716           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-2715310
RefSNP(rs#)rs4951866
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=G|Chr=chr1|Position=3263|Strand=+|dbSNP=+|Score=158|Reads=7:7:30

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87152716|allelePos=251|len=501|taxid=9606|alleles='T/G'|mol=Genomic
 AGGAAGGAGA AGGGGATGCA CTGTTGGGGA GGCAGCTGTA ACTCAAAGCC TTAGCCTCTG
 TTCCCACGAA GGCAGGGCCA TCAGGCACCA AAGGGATTCT GCCAGCATAG TGCTCCTGGA
 CCAGTGATAC ACCCGGCACC CTGTCCTGGA CACGCTGTTG GCCTGGATCT GAGCCCTGGT
 GGAGGTCAAA GCCACCTTTG GTTCTGCCAT TGCTGCTGTG TGGAAGTTCA CTCCTGCCTT
 TTCCTTTCCC
 K
 AGAGCCTCCA CCACCCCGAG ATCACATTTC TCACTGCCTT TTGTCTGCCC AGTTTCACCA
 GAAGTAGGCC TCTTCCTGAC AGGCAGCTGC ACCACTGCCT GGCGCTGTGC CCTTCCTTTG
 CTCTGCCCGC TGGAGACGGT GTTTGTCATG GGCCTGGTCT GCAGGGATCC TGCTACAAAG
 GTGAAACCCA GGAGAGTGTG GAGTCCAGAG TGTTGCCAGG ACCCAGGCAC AGGCATTAGT
 GCCCGTTGGA

  Submitted Frequency for ss87152716 back to top
There is no frequency submission for ss87152716.


  dbSNP summary of Genotypes for ss87152716 back to top
No sufficient data to compute Hardy-weinberg probability for ss87152716.


  Submitted individual genotype for ss87152716 back to top
There is no individual genotype data for ss87152716.

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