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Submitted SNP(ss) Details: ss8820742           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004487.15_16490995
RefSNP(rs#)rs6413547
Submitted Batch IDCHRX_NA10470
Submitted DateJun 05, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJun 5 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XSNP55696-39l11.p1kposition:125quality:43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8820742|allelePos=401|len=801|taxid=9606|alleles='T/C'|mol=Genomic
 CTTGTATAAt gctggtggca gtgtcaaatg gtaaagtctc tgtaaaaaac aatatgatgt
 ttccttaaaa aattaaacat agagttccca catagcccag cagtttcatt tctgtgtata
 tacctgaaat aattgaaagc agggtctcca atgggtatct gtgcacccgt atttattgca
 aaattatcca caataaccaa aaggtagaac caacccaagt gtccactgat agatgaatga
 atatacaaaa catggtacat acatacaata gaatattact cagccttaaa aaggaatgaa
 aatctgataa atgctacatc aatggaactt aaaataatta ttgtaagtga aattacccag
 acacagagga caaatattgt ataatcccac ttacacaaaa
 Y
 acccagaaaa gtcaaatgtt aaatccagag aaacagaaag tagagtagtg gttactacgg
 aataaatggg gggaaagggt taaagagcat ttgttttgta tggggaaaaa gtttcagttt
 ggaataataa aaaagttatg gaagtagata gtgactatct atgccactaa attttatgct
 tagaaatcgt taaaatagtg aaGCTgcagc ggctcatgcc agtaatccca gcactttggg
 agaccgaagt gggtggatag cttgagccct ggagtttgag atcagcctgg gcaacatagt
 gagaccctgt ctctacaaat aaaattagcc atgtgtggtg tcatgtgcct gtggtcccag
 ctactggggg agctaaggtg ggaagatcac ctgagccTTG

  Submitted Frequency for ss8820742 back to top
There is no frequency submission for ss8820742.


  dbSNP summary of Genotypes for ss8820742 back to top
No sufficient data to compute Hardy-weinberg probability for ss8820742.


  Submitted individual genotype for ss8820742 back to top
There is no individual genotype data for ss8820742.

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