>gnl|dbSNP|ss8820745|allelePos=401|len=801|taxid=9606|alleles='C/T'|mol=Genomic
TGCTGATCCA CAGAATTGTA AGCAAATAAA CTGTTGTCAT AGCATAATAC TGAGTTTTGG
AATAGTTTGT CATACATTAA AAATTAACTG ACATACAGGT TGAAGTAAAA TGACTGCTAC
TTCATATCTG AAGATATTGA TCAATTACTC TGCCTTCCTT GTTATGTATA AAGATGCTGT
TAGTCTATCT TCAAGCAAAA TAAACAGAGG GAACTAATCA AAATGTGCTG TCTTCATAAT
TGTTCGTGGG GCCAATAACT TTGTCTTAAC AAACTTATTC CTAAAGACCA AAACACTTGA
TAAAGCATAG CCTTAGTGGA AGTATACTTT TGGTCAACCT CATCTGCCAT TTTTTTTTTC
TAATATAGCA CAGTGAGAAT ACTGACAGTG AGTAGCATGA
Y
TGGTGTCACC ATTAATGCTT GGGTGATTTC ATAAAGGTTA TTGTATTTTT TTTTGTAAAG
TTCAGCATGC ACATCTTTTG ACCAAAGAAA ATATGACTTT AATAATGGCC AAGAAAGGAT
GCTCGACAGT GAAAGTATGT CAGCCACCTC TGACAGAAAA ATAAAAGAAG AAATATAATA
TGTTGCTCAT TGCATAAATT AAGCAAGTGT TTTCTAACAA GGTCAGCAAA ATCAGTTATT
ACCTTCTCCA GAATATTTGC TTACCTGTTT ACATCTACCA ACCCTTGTTT GGCCTGCCAG
GAGTTGTACC GATATTTTTC TCATAAATTT AAGGATACAG AGTTAACACC CCAAACAACT
AATGTCAGTC AGTATTCATG GAAATGAAGT TTAAATTTAT
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | C=0.54424781
| T=0.45575222 | C/T=0.50442475
C/C=0.29203540
T/T=0.20353982
| Pr(chiSq=0.032,df=1)
=1.000 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | C=0.69767439
| T=0.30232558 | C/C=0.48837209
C/T=0.41860464
T/T=0.09302326
| Pr(chiSq=0.003,df=1)
=1.000 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | C=0.71511626
| T=0.28488371 | C/C=0.51162791
C/T=0.40697673
T/T=0.08139535
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | T=0.65044248
| C=0.34955752 | C/T=0.43362832
T/T=0.43362832
C/C=0.13274336
| Pr(chiSq=0.243,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.58163267
| C=0.41836736 | C/T=0.42857143
T/T=0.36734694
C/C=0.20408164
| Pr(chiSq=0.698,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.63414633
| T=0.36585367 | C/T=0.43902439
C/C=0.41463414
T/T=0.14634146
| Pr(chiSq=0.119,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | C=0.62941176
| T=0.37058824 | C/C=0.42352942
C/T=0.41176471
T/T=0.16470589
| Pr(chiSq=1.170,df=1)
=0.294 | Genotype
Freq. |
| HAPMAP-GIH | 174 | 174 | T=0.53448278
| C=0.46551725 | C/T=0.54022986
T/T=0.26436782
C/C=0.19540229
| Pr(chiSq=0.638,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | T=0.77777779
| C=0.22222222 | T/T=0.61111110
C/T=0.33333334
C/C=0.05555556
| Pr(chiSq=0.115,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | T=0.50999999
| C=0.49000001 | C/T=0.46000001
T/T=0.28000000
C/C=0.25999999
| Pr(chiSq=0.317,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | T=0.64685315
| C=0.35314685 | C/T=0.48251748
T/T=0.40559441
C/C=0.11188811
| Pr(chiSq=0.451,df=1)
=0.527 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.57386363
| C=0.42613637 | C/T=0.53409094
T/T=0.30681819
C/C=0.15909091
| Pr(chiSq=0.745,df=1)
=0.403 | Genotype
Freq. |
