NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss9809054           
Submitter
HandleBCM_SSAHASNP
Submitter SNP IDchr1.NT_022052.2_37016
RefSNP(rs#)rs6656783
Submitted Batch IDBaylor-WGS-200310
Submitted DateNov 05, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJun 27 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBAYLOR-WGS-200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality50866204 508 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss9809054|allelePos=501|len=1001|taxid=9606|alleles='G/T'|mol=Genomic
 GACTTGGCCA TGTGGGCTCT TTTTTGGTTC CATATGAACT TTAAAGTGGT TTTTTTCAAT
 TCTGTGAAGA AAATCATTGT TAGCTTCATG GGGATGGTAT TGAATCTATA AATTACCTTG
 GGCAGTATGG ACATTTTCAC GATATTGATT CTTCCTATCC ATAAGCATGG AATGCTCTTC
 CATTGGTTTG TGTCCTCTTT TATTTTGTTG AGCAGTGTTT TGTAGTTCTC CTTGAAGAGC
 TCCTTCACGT CCCTTGTAAG TTGGATTCCT AGGTAATTTA TTCTCTTTGA AGCAACTGTG
 AATGGGAGTT CATTCATGAT TTGGCTCTCA GTTTGCCTGT TATTGCTGTA TAAGAATGCT
 TGTGATTTTT GCACATTGAT TTTGTATCCT GAGACCTCAC TGAAGTTGCT TACCAGCTTA
 AGGAGATTTT GGGCTGAGAT GATGGTGTTT TCTAGATATA CAAACATGTC ATCTGCAAAC
 AGGGACAATT TGACTTCCAA
 K
 AAATGACTAA GATCAGAGCA CAACTGAAGG AGATAGAGAC AAAAAACCCT TCAAAGAATC
 AATGAATCCA GGAGCTGGTT TTTTGAAAAG ATCAACAAAA TTGATAGACC ACTAGCAAGA
 CTAATAAAGA AGAAAAGAGA GAAGAATCAA ATAGACACAT TAAAAAATGA TAAAGGGGAT
 AGCACCACCA ATCCCACAGA AATGCAAACT ACCATCAGAG AATACCGTAA ACACCTCTAT
 GCAAATAAAC TAGAAAATCT AGAAGAAATG GATAAATTCC TCAATACATA AACCCTCCCA
 AGACTAAACC AGGAAGAAGT TGAATCTCTT AATAGACCAA TAACAGGCTC TGAAATTGAG
 GCAATAATAG CATACCAACC ATAAAAAGTC CAGGACAAGA GGGAATCACA GCCTAATTCT
 ACCAGAGGTA CAAGGAGGAG AAGTTGCCAT TCCTTCTGAA ACTCTTCCAA TCAAGAGAAA
 AAGAGGGAAT CCTCCCTAAC

  Submitted Frequency for ss9809054 back to top
There is no frequency submission for ss9809054.


  dbSNP summary of Genotypes for ss9809054 back to top
No sufficient data to compute Hardy-weinberg probability for ss9809054.


  Submitted individual genotype for ss9809054 back to top
There is no individual genotype data for ss9809054.