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Submitted SNP(ss) Details: ss9809580           
Submitter
HandleBCM_SSAHASNP
Submitter SNP IDchr1.NT_077949.1_170801
RefSNP(rs#)rs161315
Submitted Batch IDBaylor-WGS-200310
Submitted DateNov 05, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJun 27 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBAYLOR-WGS-200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality54650413 -153 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss9809580|allelePos=501|len=831|taxid=9606|alleles='C/A'|mol=Genomic
 TTAATAAGTC TCGGCTGGGC GCAGTGGGTC ACACCTGTAA TCCGAGCACT TTGGGAGGCC
 GAGGTGGGTG GATCAGGAGG TCAGGAGATT GAGACCATCC TGGCTAACAC GGTGAAACCC
 CGTCTTTACT AAAAATGCAA AAAAAAAAAA ATAGCTGGGC GTGGTGGTGG GCGCCTGTAG
 TCCCAGCTAC TCAGGAGGCT GAGGCAGGAG AATGGCATGA ACCCAGGAAC CGGAGCTTGC
 AGTGAGCCGA GATTGTGCCA CTGCACTCCA GCCTGGGAGA CAGAGCGAGA CTCCATCTCA
 AAAAAAAAAA AAAATAAAGT CTCTGACCAG GGGCGCTGGC TCACATCTTA ATCCCAACAC
 TTTGGGAGGC CGAGGTGGGC GGAACACCTG AGCTCAGGAG TTCGAAACCA GCCTGTCCAA
 GATGGCGAAA CCCCATCTCT ACTAAAAATA CAAAAATTAG CTGGCATGTT ACTTGGCCCT
 TGTAATCCCA GATGCTTGGC
 M
 GGCTGAGGGA TGAGAATCAC TTGAACCCGG GCGGCAGAGG TGGCAGTGAG CTGAGATTGT
 GCCTCTGCAC TTCAGCCTGC GTGACAGAGT GAGACTCTGT CTCAAACAAA AAAACCAAAA
 AAGAAAAAAA TTAAAAAAGC AAAATGAAAT CTTTTGTGCT ACACAGAAAC ATTGGCCACT
 CATGGGGTAA AAATCTCAGG GCCAAGCCTT GCTTTATAGA AACGTATAAG CAAGAAAAGT
 GTAGAAGTGT TTATGTCTTG GTTTCAAGGT GACTGCATAG CTAAGACAAG TTGACTTAAA
 GGAGATCAAG ACTGGAGATG ACAAGAGTGA

  Submitted Frequency for ss9809580 back to top
There is no frequency submission for ss9809580.


  dbSNP summary of Genotypes for ss9809580 back to top
No sufficient data to compute Hardy-weinberg probability for ss9809580.


  Submitted individual genotype for ss9809580 back to top
There is no individual genotype data for ss9809580.