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Submitted SNP(ss) Details: ss9810301           
Submitter
HandleBCM_SSAHASNP
Submitter SNP IDchr1.NT_022052.2_54414
RefSNP(rs#)rs2379541
Submitted Batch IDBaylor-WGS-200310
Submitted DateNov 05, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJun 27 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBAYLOR-WGS-200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality55530116 -209 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss9810301|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 TCACATAGGA TTCCAGAACA CTCCTGCTGT GGTGGGAATG TTTGTCCGTC ACGTAGCATT
 CCAGAAAACT GTTATGAGGG TCTGAATGTT TGTCTCTCAC ATAGGATTCC AGAACACTGC
 CACGAGGGTC TGAATGTTTG TCCCTCACGT AGGATTCCAG AACACTCCTG CTGTGGTCTG
 AATGTTTATC CCTCACGTAG GATTCCAGAA CACTGCTATG AAATTCTGAA TGTTTGTCCC
 TCACATAGGA TTCCAGAACA CTGCTAAGAA GGTCTGAATG TTTGTCCCTC ACTTAGGATT
 CCAGAAAACT ACTACAAGGG TCTGAATGTT TGTCCCTCAC ATAGGATTCC AGAACACTCC
 TGTTGTGGTC TGAAAGTTTG TCCCTCACAT AGGATTCCAG AACATTGCTA CGAGGGTCTG
 AATATTTGTC TTTCACGTAG GATTCCAGAA CTCTGCTGCT GTGATCTGAA TGTTTGTCCC
 TCACAAAGGA TTCCAGAACA
 Y
 TTTGCTGTGG TCTGATTGTT TGTTCCTCAC ATAGGATTCC AGAACACTGC TATGAGGCTC
 TGAGTGTTTG TCCCTCACAT AGGATTCCAG AGCACTGCTA CGAGGCTCTG AGTGTTTGTC
 CCTCACATAG GATTCCAGAA CACTGCTGCC ATTGTCTGAA TGTTTGTCCC CCACATAGGA
 TTCCAGAAGC CTGCTGCTGG GGTCTGAATG TTTGTCCCCC ATCTAGGATT CCAGAACACT
 GTTGCGAGGG TCTGAATGTA TGTCCCTCAC ATACAATTCT AGAAAATTGA TGCTAGGGTC
 TGTGTGTTTG CCCTCAACAT ATGATTTCAA AACACTGCTC CTGGGTTCTG AATGTTTGTC
 CTTCACATAG GAATACAGAA CACTGCTGCT GGAGTGTGAA TGTTTGTCAC TCACATAGAA
 TTCCAGAACA CTGCTGCGAG GATCTGAATG TTTGTCCCTC ACATGGGATT CCAGAACACT
 CCAGCACAAT ATTACGAGGT

  Submitted Frequency for ss9810301 back to top
There is no frequency submission for ss9810301.


  dbSNP summary of Genotypes for ss9810301 back to top
No sufficient data to compute Hardy-weinberg probability for ss9810301.


  Submitted individual genotype for ss9810301 back to top
There is no individual genotype data for ss9810301.