NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss118830204           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000090907_NCBI36.1_chr1_79174842
RefSNP(rs#)rs1489396
Submitted Batch IDILLUMINA_WTSI:NA18507_c1
Submitted DateJan 21, 2009
Publication Cited18987734
First entry to dbSNPJan 21 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss118830204|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 TCTTTGGAAA TATATTTATG TAGTCTCCAT CCATATTCAT ATGAGGATGA ATATGTTTCA
 TGTTATATGA ATCAAAAAAG AAAACTTTGA GAGCTGAAAC AAAACCATGA AAATAAAAAA
 AGTGAAATTA CTTTAATCAA TATACATCAT AAATATATTA GCTTAGAGAC AATTTCATCC
 ATCATTATTG TGTTTTAAAT TATTTATAAC AAGTAGAGTG AACATTCTTA ATGTGTTTGG
 ACAATGTAAT
 R
 TATATGTTAA AAATCTGACT CAAGTTTTAA TTTTTTAATT TCACTATGGC ACTCATGGTT
 TAACTTTTTT TGCATTAAAT AAAATATAAT ATGTGTATGT AACCAAGCAA GCTATAAAAT
 TATAATTACT AAAGCAAAGA TAAGCAACTA CAATGGCTTA CAGAATAGTG TCTACAACTT
 ACTAATGAGT GATTTAATTA AACGTTTGAG TGATAATTCC TTTGACCTGC TGTATTATCA
 CCATTTTCAT

  Submitted Frequency for ss118830204 back to top
There is no frequency submission for ss118830204.


  dbSNP summary of Genotypes for ss118830204 back to top
No sufficient data to compute Hardy-weinberg probability for ss118830204.


  Submitted individual genotype for ss118830204 back to top
There is no individual genotype data for ss118830204.