| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008583.15_11051502 | | RefSNP(rs#) | rs7917700 | | Submitted Batch ID | CHR10_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008583
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR10_OVERLAP_SNPS | | Ascertainment Samplesize | 8 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:10bA338F14-6h08.q1cposition:191quality:43sequence:10bA338F14-28b10.p1cposition:305quality:35sequence:10bA338F14-30e08.p1cposition:478quality:32sequence:10bA338F14-28b10.q1cposition:-213quality:56sequence:10bA338F14-30d03.p1cposition:416quality:42sequence:10bA338F14-22e05.p1cposition:-451quality:44sequence:10bA338F14-1f07.q1cposition:-440quality:42 |
>gnl|dbSNP|ss12953976|allelePos=398|len=548|taxid=9606|alleles='C/T'|mol=Genomic CTAGGATGCA GGGGAAGAGG AATAAAAAAA GTGACACCTT CAGAACAGAA TTTGGGGGAA
TAAAGAGGGC CAGACTTTCA ATTAAAATAT TTTCATCTgg ccaggtgctc tatctcacag
ctgtaatccc agcattttgg gaggctgagg caggtggatc atttgagcct aagagtttga
gaccagcctg ggcaaaacac catctctaca aagaaaaaaa aaaaaagaat taaaaattag
tcgggcatga tggtgcatgc ctgtggtccc agctatttcc aaggccgagg caggagtata
gcttgacccc cggaggtgga ggctgcagtg aactgtgatt gtgccactgc actcctgcct
gggcgacagc cagaccctgt ctcaaaaaat aaaaTTT
Y
ATTTTTATTT CTTCCCACAT AACTCCTGTT AGTCCTTTCT CGTTTCACCC TTTATTCTCC
CCCATTCTGA TTCTAAACCA GAATCAGCCT CTCTCAATTC ATACATGTTT TCATCTTATT
TCTGAACAAA GGGAAAAAAT AATCTGGAAG
There is no frequency submission for ss12953976.
No sufficient data to compute Hardy-weinberg probability for ss12953976.
There is no individual genotype data for ss12953976.
| 
