Submitted SNP(ss) Details: ss12953981

Submitted SNP(ss) Details: ss12953981

Submitter
Handle	SC_SNP
Submitter SNP ID	NT_008583.15_11065315
RefSNP(rs#)	rs9414745
Submitted Batch ID	CHR10_Overlap_SNPs
Submitted Date	Oct 22, 2003
Publication Cited	[1] Overlap SNPs found by comparing shotgun reads to finished sequence [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Oct 22 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_008583
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR10_OVERLAP_SNPS
Ascertainment Samplesize	6
Population	N.D.

Allele
Observed Allele	G/A
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence:10bA338F14-5e01.q1cposition:238quality:56sequence:10bA338F14-26d06.p1cposition:-309quality:44sequence:10bA338F14-18f11.q1cposition:-218quality:44sequence:10bA338F14-25c03.p1cposition:269quality:45sequence:10bA338F14-1g02.q1cposition:-387quality:44

Fasta sequence (Legend)

 GACATACCGC TGAATGAGTA GAGAGAGGAC AAGGGACGGT GAGAGGTAGT ATTTTTTTAT
 TTACTTGATA CATTAAAAAA AACTTGTTAG CTTTATTAGA AAACAAAAGT TAAACAAAAA
 TCACCTGTAT TTTCAAATTA ACATTTTGGT
 R
 TATTGTTTCA CAATTTTTCA TTTGCATATA TAGAGATCAT ACTATGCATA CTATTTGGTA
 TCACATTTTC CCACTATGAC TTAATAAACA TGTATTTACA TCATAACAAC TCCATGTATT
 CACTGCATAA TTGCACATTA TTGTGCTGGA

Submitted Frequency for ss12953981

There is no frequency submission for ss12953981.

dbSNP summary of Genotypes for ss12953981

No sufficient data to compute Hardy-weinberg probability for ss12953981.

Submitted individual genotype for ss12953981

There is no individual genotype data for ss12953981.

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