| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_004321.15_112882 | | RefSNP(rs#) | rs3100865 | | Submitted Batch ID | CHR1_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004321
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_OVERLAP_SNPS | | Ascertainment Samplesize | 7 | | Population | N.D. |
| | Allele | | Observed Allele | T/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:1bA740P5-12h06.p1cposition:99quality:40sequence:1bA740P5-39d04.q1cposition:290quality:56sequence:1bA740P5-9e01.p1cposition:-296quality:37sequence:1bA740P5-24g07.p1cposition:86quality:35sequence:1bA740P5-21d09.p1cposition:-161quality:40sequence:1bA740P5-9e01.q1cposition:-276quality:26 |
>gnl|dbSNP|ss12992588|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic CATGAGCTTC ATCTACATGG GTGGGGGACG GCGGCTTGGG GCCTTGATTC AGGTGCTGGG
GCCCCTTCTG TCCCTGTCCC TGCCCTGAGG ACTGTTGGGG TCAACCCTGG CTGAGTGTGG
ACGTTGCTGG TTCAGCGGAT ACCCTGAGTG CCGAGGCCAG GTAGGCCGCT GGGGCTCAGG
GGGACAGGCT GGCTGAGGAC
K
CTGGGGATCA CGAGTCCGTG GTGGGCTTTG GAGCCAGCCT GGGTGGGGCT CCAGGTGGGG
ACAGAGGAGG CTCTGTGTCT GGGCTCTGGG GGCCCCGCTG GAAGAGGCCA AGGACATCAG
AACTGACGGG AGGACCAGGA AGGGGTGGCC GGGGGCTGAG GGAGGTGGGG AAGTCGGGGG
CCCGAAGCCA AGGGTGGGGG
There is no frequency submission for ss12992588.
No sufficient data to compute Hardy-weinberg probability for ss12992588.
There is no individual genotype data for ss12992588.
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