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Submitted SNP(ss) Details: ss37044373           
Submitter
HandleBROAD
Submitter SNP IDmt3480
RefSNP(rs#)rs28358584
Submitted Batch IDHapMap-SNP-2004-08-20
Submitted DateApr 25, 2005
Publication Cited[1] The International HapMap Project
First entry to dbSNPApr 25 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBROAD_ENCODE_PCR_RESEQ-2004-08-32C
Ascertainment Samplesize32
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss37044373|allelePos=321|len=673|taxid=9606|alleles='A/G'|mol=Genomic
 AGCGCCTTCC CCCGTAAATG ATATCATCTC AACTTAGNAT TATACCCACA CCCACCCAAG
 AACAGGGTTT GTTAAGATGG CAGAGCCCGG TAATCGCATA AAACTTAAAA CTTTACAGTC
 AGAGGTTCAA TTCCTCTTCT TAACAACANA CCCATGNCCA ACCTCCTACT CCTCATTGTA
 CCCATTCTAA TCGCAATGGC ATTCCTAATG CTTACCGAAC GAAAAATTCT AGGCTATATA
 CAACTACGCA AAGGCCCCAA CGTTGTAGGC CCCTACGGGC TACTACAACC CTTCGCTGAC
 GCCATAAAAC TCTTCACCAA
 R
 GAGCCCCTAA AACCCGCCAC ATCTNCCATC ACCCTCTACA TCACCGCCCC GACCTTAGCT
 CTCACCATCG CNCTTCTACT ATGAACCCCC CTCCCCATAC CCAACCCCCT GGTNAACCTC
 AACCTAGGCC TCCTATTTAT TCTAGCCACC TCTAGCCTAG CCGTTTACTC AATCCTCTGA
 TCAGGNTGAG CATCAAACTC AAACTACGCC CTNATCGGCG CACTGCGAGC AGTAGCCCAN
 ACAATCTCAT ATGAAGTCAC CCTAGCCATC ATTCTACTAT CAACATTACT AATAAGTGGC
 TCCTTTAACC TCTCCACCCT TATCACAACA CAAGAACACC TCTGATTACT CC

  Submitted Frequency for ss37044373 back to top
There is no frequency submission for ss37044373.


  dbSNP summary of Genotypes for ss37044373 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU118118A=0.96610171
G=0.03389831A/A=0.96610171
G/G=0.03389831
Pr(chiSq=55.136,df=1)
=0.001
Genotype
Freq.

  Submitted individual genotype for ss37044373 back to top
There is no individual genotype data for ss37044373.