Submitted SNP(ss) Details: ss80750510

Submitted SNP(ss) Details: ss80750510

Submitter
Handle	KRIBB_YJKIM
Submitter SNP ID	KHS1000042
RefSNP(rs#)	rs4385
Submitted Batch ID	KHB2007_2_FP-TDI
Submitted Date	Nov 26, 2007
Publication Cited	16376517
First entry to dbSNP	Nov 26 2007 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	FP-TDI
Ascertainment Samplesize	176
Population	KHP_Korean

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	population count: 2
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 CTATGTCCTC TGACTCTTGA ACAGCACTAG GCAAAGGGCT GGCCACACAG CAGGTGCTCA
 ATC
 Y
 GTGGGTGAGA AAACACTGAA TGAACACAGG GGTCATCTGA GCCTCTGAAC CTCCAAGGCA
 GCCTCCCGGC AAAATGTCCC CGCAAATGTT CCCTCTGACC CCAGCTCATT CCAACCTCTT
 TCCTAAGTTA GTGGGAAAGG GCTTGATCCC ATCCCCTCAC ACCCCATCAG CACCCACTGC
 TGCCCAGCAC CCACAGGGCG CCAGACGCTT CACCACAGTT TCGGGTAAAT TGCCACTTTT
 TTTTTTTTTT TTTTTTTGAG ACAGAGTTTC ACTCTTGTTG CCCAAGCTGG AGTGCAATGG

Submitted Frequency for ss80750510

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
KHP1 - EAST ASIA	176	T=0.64772701	C=0.35227299		T/T=0.44318199 C/T=0.40909100 C/C=0.14772700		KHB2007_2_FP-TDI	KRIBB_YJKIM

dbSNP summary of Genotypes for ss80750510

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
KHP_Korean - EAST ASIA	176	176	T=0.64772725	C=0.35227272	T/T=0.44318181 C/T=0.40909091 C/C=0.14772727	Pr(chiSq=0.944,df=1) =0.343	Genotype Freq.

Submitted individual genotype for ss80750510

There is no individual genotype data for ss80750510.

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