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Submitted SNP(ss) Details: ss80750514           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS1000074
RefSNP(rs#)rs6800
Submitted Batch IDKHB2007_2_FP-TDI
Submitted DateNov 26, 2007
Publication Cited16376517
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodFP-TDI
Ascertainment Samplesize158
PopulationKHP_Korean
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80750514|allelePos=61|len=121|taxid=9606|alleles='A/C'|mol=Genomic
 AGGCAACACC AAGGGGACCT TATCAATAGC CCTGTCCCCT GCCCGCCTCC AAAGTCCCCC
 M
 ACAAAGTATG AAGGAAGCCC CACCTGGGGG TCTCCAGGAA GTCGAGGCTG GCCTCTGAGG

  Submitted Frequency for ss80750514 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
KHP1
EAST ASIA
158A=0.82278502
C=0.17721500
A/A=0.67088598
A/C=0.30379701
C/C=0.02531600
KHB2007_2_FP-TDIKRIBB_YJKIM


  dbSNP summary of Genotypes for ss80750514 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
KHP_Korean
EAST ASIA
158158A=0.82278478
C=0.17721519A/A=0.67088610
A/C=0.30379745
C/C=0.02531646
Pr(chiSq=0.138,df=1)
=0.752
Genotype
Freq.

  Submitted individual genotype for ss80750514 back to top
There is no individual genotype data for ss80750514.

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