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Submitted SNP(ss) Details: ss80750552           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS1000281
RefSNP(rs#)rs138931
Submitted Batch IDKHB2007_2_FP-TDI
Submitted DateNov 26, 2007
Publication Cited16376517
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodFP-TDI
Ascertainment Samplesize174
PopulationKHP_Korean
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80750552|allelePos=301|len=601|taxid=9606|alleles='C/G'|mol=Genomic
 CTGGCTGATT CAAGCCAGAG GACAGCCTGG GGCAGCTGCC TGCCTTCTCC AGGCTGTGGC
 TGGCTGGCGG AGGGGGCGCC TGCTGGTTTG GATCAGGAGA TGGGGAGCCC CTCTTACCAT
 CTGGGCCGTT GTCCCACTTC AGCATGAGGT CGACGGCATA CATGGCCCGG GATGAGGGGT
 AGTCGCAGAG GCCCAGGGGT GGTGGCTTGG CACAGGCCAC CTGGAACAGC TCCGTGAAGG
 CCCGGAAGAT CTCAGCCTGG GGACCGGGGA GCCTGAGTTA CGAGGCCTGC TCAGAACAGC
 S
 TCTCAAGAGG GGGTCTGCTG CCCCTGCCCA AGTCCCGGGC CCCACGTGGC CCAAGTCACC
 CCCTCCCACA TCTTCACGTC TCTAGACCTC ACCATGGCCA CCTCCGCCCA GCACCTGCCC
 TCTTACTCCT GACGCCCACC TTCTGCAAAT CTGCCCATCT CCTGCCGCAG ACCCCGTTGC
 TCCCCACTGC CCCAAGGAGC TCAACACAGC ACCCAGAATG CCGCTGCTGG ACATGGAGGC
 CCAGCCAACG TCTCCATATG ACTGGGAATC TAGGGTCAGG CAGTGCCGCC ACCCTCTGGC

  Submitted Frequency for ss80750552 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
KHP1
EAST ASIA
174G=0.99425298
C=0.00574700
G/G=0.98850602
C/G=0.01149400
C/C=0.00000000
KHB2007_2_FP-TDIKRIBB_YJKIM


  dbSNP summary of Genotypes for ss80750552 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
KHP_Korean
EAST ASIA
174174G=0.99425286
C=0.00574713G/G=0.98850572
C/G=0.01149425
Pr(chiSq=0.000,df=1)
=1.000
Genotype
Freq.

  Submitted individual genotype for ss80750552 back to top
There is no individual genotype data for ss80750552.