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Submitted SNP(ss) Details: ss10993719           
Submitter
HandleBCM_SSAHASNP
Submitter SNP IDchr21.NT_011512.8_57089
RefSNP(rs#)rs458354
Submitted Batch IDBaylor-WGS-200306-3
Submitted DateJun 30, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJun 30 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBAYLOR-WGS-200306
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:50188215position:356quality:51sequence:50400192position:-281quality:41sequence:56351184position:94quality:39

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss10993719|allelePos=201|len=2100|taxid=9606|alleles='A/G'|mol=Genomic
 CAAGTTTAAG GTTTTGGCAA GTGTTTGAGA AAAATATGAA TTAAGCTCAT TTTCTGTGGA
 GACAAGTCTC TAGGCGTTTA GTTTTGGTTA AGTTAAATAC TTAAATCTAT TTAAAATTTT
 AAAGACCTTA GTAATGTAAA CAAATGGTGT TGAGTTTGGA CTTCTCTACA ATATCTATGT
 GGAATCTTAG GAAAGGAAGA
 R
 TGAAAGGATA CAATACATTT TAAATGGTAG TTCAGCCTAA ATCCTAAGCA TAAGCATAAT
 ACACTGCTGC Attttttttt gacagagcct aactctgtcc cccagactga agtgcagtgg
 tgccatcttg actcactgca accccagtct cctagattca agctattctc ctgcctcagc
 ctcccaagta tctgggatca caggcagaca ccagtcacac ccagctTGTt ttttgttttt
 tatgtttttt ctttttttgg agacacagtc ttgctctgtc acccaggctg gaatacaatg
 gcacaacctc ggctcactgc aacctccact tcccaggttc aagcgattct cctgcctcag
 cttcctgagt agttgggatt acaggcatgt gctgccatgc ccggctatct gcctcccagg
 ttcaagcgat tcttctgcct cagcctcttg agtagctggg attacaggca tgtgccacca
 tgcctggcta atttttgtat ttttagtaga gacagggttt caccatgttg gtcaggccgg
 tctcaaactc ctgacctcct gatccaccag cctcagcctc ccaaagtgct agaataatag
 gcgtgagcca ccatgcccag cccatttttt gtatttttaa tagaggtgag gtttcaccat
 gttgaccagg ctgatctcga actcctgacc tcaagtgatc tgcccccctc cacctgccaa
 aatgctggga ttacagacaa gagccactat gcctagccAA TATGTTACTT TAAAAAAATA
 AGTTATTCAT TTTAGTTTTC TTCTGTTGCT AACGATCATT TCTATTTtgt agggaaaagg
 aagagggatc agactgttac tgtgtctatg tagaaaggga agagataata aattccattt
 ttacctgtac cttgaacaat tgctttgtcc tgagattctg ttaatctgta actttgcccc
 aatcactgtg ccccaacctc tttgccccaa ccttgagctc acaaaaacat gtgttgtatg
 gaatcaaggt ttaagggatc tagggctgtg ccttgttaac aaaatgttta caagtagtat
 gcttggtaaa agtcatcgcc attctctagt ctcgataaac caagggcacg ctgcactgcg
 gaaaatggca gggacctctg ccctggaaag ccgggtattg tccaaggttt ctccccatgt
 aatagtctga aatatgcctc atgggatgag aaagacctga tcatccccca gcccaacacc
 cataaatggt ctgtgctgag gtggattagt aaaaggggaa agcccttgca gttgagatag
 aggaaggcca ctgtctcctg cctgctcctg ggaatggact gtctcggtat aaaacccgat
 tttacatttg ttcaattctg agataggaga aaaaccaccc tatggtggga ggcaagacat
 gttggcagca atgctgcttt attgttcttt actccactga gatgtttggg cagagagaaa
 cataaatctg gcctacgtgc acattcaggc atagtacctc cccttgaact taattatgac
 acagattctt ctgctcacat gtttttttgc tgaccttctc cctattatca ccctgctctc
 ctaccacatt cctcttgctg agataatgaa aataataatc aagaaaaact gagggaactc
 agaggccggt gctggtgcag gtgcttggta tgctgagcgc tggtcccctg gactcacttt
 tctttctcta tactttgact ctgtgtctta tttcttttct cagtctctca tcccacctga
 ctagaagtac ccacaggtgt ggaggggctg gccacccctt caTATTTTCA CTTAATTTAC
 TCTGAATCTA TGCCACTTTT GCATTTGAGG CTAATGTTT

  Submitted Frequency for ss10993719 back to top
There is no frequency submission for ss10993719.


  dbSNP summary of Genotypes for ss10993719 back to top
No sufficient data to compute Hardy-weinberg probability for ss10993719.


  Submitted individual genotype for ss10993719 back to top
There is no individual genotype data for ss10993719.

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