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Submitted SNP(ss) Details: ss109967568           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_3750_chr1_3727599
RefSNP(rs#)rs9424288
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:116

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109967568|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic
 GAACGGGAAG GGGAAGTGTG TGTGCATGAG TGATGGAGCT TACTTCCCTT GATTTCTCCT
 GGCTGTGTCC ACTGAGAGTC CAGCCACAGC GAACTACCCA GCAGCAGTGG GCATGAGGCC
 CCCAGCGCTG TCCTGAGACA TCCATTCCTG CTAATGGGAA CCAGGCCTCT GTGCCCAGAT
 GGCTGATTCC AGGTCCGGGG
 M
 AGGAAGGCAC CAAACAGGAG GGAGCTCTCT GAGGCTGCGT GGCTCTCATC CAGGCCTCAG
 GAGCCCAGCT GAAGAGTCTG CCATAGGCTA GAGCTGGGAT AATTCACGCA TCACTAAGCA
 TGGTAACTGC TGTGACTGGA ACACATTGAA TAATTTAAAT CCATGGTTCA TAACGACACT
 ACAGACAAAA CAAAACAAAT

  Submitted Frequency for ss109967568 back to top
There is no frequency submission for ss109967568.


  dbSNP summary of Genotypes for ss109967568 back to top
No sufficient data to compute Hardy-weinberg probability for ss109967568.


  Submitted individual genotype for ss109967568 back to top
There is no individual genotype data for ss109967568.