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Submitted SNP(ss) Details: ss1367645216           
Submitter
Handle1000GENOMES
Submitter SNP IDPHASE3_V1_373
RefSNP(rs#)rs201888535
Submitted Batch IDPhase3_V1
Submitted DateAug 16, 2014
Publication CitedN.D.
First entry to dbSNPAug 16 2014 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSEQ
Ascertainment Samplesize5008
PopulationN.D.
Allele
Observed AlleleCTA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 5
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1367645216|allelePos=26|len=51|taxid=9606|alleles='CTA/-'|mol=Genomic
 ATGTTTCTCT ACGTGTGGCC TTTCC
 N
 CTAAGTCATT GGATAAATTT TTTGC

  Submitted Frequency for ss1367645216 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR694CTA=0.70029998
-=0.29969999
Phase3_V1-AMR1000GENOMES
AFR1322CTA=0.89260000
-=0.10740000
Phase3_V1-AFR1000GENOMES
EAS1008-=0.72920001
CTA=0.27079999
Phase3_V1-EAS1000GENOMES
SAS978CTA=0.55419999
-=0.44580001
Phase3_V1-SAS1000GENOMES
EUR1006CTA=0.66100001
-=0.33899999
Phase3_V1-EUR1000GENOMES


  dbSNP summary of Genotypes for ss1367645216 back to top
No sufficient data to compute Hardy-weinberg probability for ss1367645216.


  Submitted individual genotype for ss1367645216 back to top
There is no individual genotype data for ss1367645216.