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Submitted SNP(ss) Details: ss163004864           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_3723326
RefSNP(rs#)rs9286791
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163004864|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TCTGAGCACA GCAGAGCGTG CACGCAAATG CAAGGGTGAG AAGCAGAGCG CCCGCGTGAT
 TACGTTCCAG GCCAGAAGAC AGAACGCGCC AGGCACCGCG GGCTCCCCGC CAGCCTGCTG
 CCCACGGTTC CTCGTGGGGT TCCCACTCTC TTCATCCCTG CTCTTCCTGA GCCACGCCAC
 ATGCACTTGC CCTGCAGAAT GTGGGGCTTA TGCAGGCCTG ACTGCCTGGG CAGCCAGCTT
 CTTTCCTTTA
 Y
 GACCAGCTGT GGGACCGTCT GCATGGGGAC AGGGAGCTCA TCTCGTCCTC CTGTTGGATA
 TAAACGCGGG ATCGCTGGTT CCCTGAGTCT TCTGGACATT CGAGTTGTTC CTGGTTCCTT
 CCCTTCTATT TAAACAACAC TCACGAGGCT GGGCGCGGTG GCTCACGCCT GTAATCCCAA
 CACTTTGGGA GGCAGAGGTG GGTGGATCAC CTGAGGTCAG GATTTTGAGA CCAGCCTGGC
 CAGCTTGGTG

  Submitted Frequency for ss163004864 back to top
There is no frequency submission for ss163004864.


  dbSNP summary of Genotypes for ss163004864 back to top
No sufficient data to compute Hardy-weinberg probability for ss163004864.


  Submitted individual genotype for ss163004864 back to top
There is no individual genotype data for ss163004864.