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Submitted SNP(ss) Details: ss16396608           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_004321.15_1022705
RefSNP(rs#)rs9424286
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600401465912.F 276 35HuAA507s19600403066823.F -51 48

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16396608|allelePos=501|len=1001|taxid=9606|alleles='G/T'|mol=Genomic
 gaggctgagg caggagaatt gcttaaacct aggaggcgga ggttgcagtg agccaagatt
 gcaccactgc attccagcct gggtgacaga gcgagactcc atctcaaaat aacaacaaca
 ataaaagact gacaaagctg actctttgta gcaatgatac caaattctag cctgtttcta
 gtagagcatt atgtgactga tcaaggccct gaaggaaatt gaagtatttt accccaaatt
 atatttcctt gctgtatctt aaaacaatcc tgcaaggctg cctattgtgg gggaaatcca
 cattctgaag atagtatcct tgctttgcta ggcctttttc ctgatccagg agagaatcaa
 ctCTGATAAT AAATAAATAA ACAAAGAAAA AAACAAAAAC CATTTACAgg ccgggcgcgg
 tggctcactc ctgtaatccc aacactttgg gaggctgagg caggcggatc acctgaggtc
 aggagttcaa gaccagcctg
 K
 ccaacatggt gaaaccccgt cttaactaaa aatacaaaaa ttagccaggt ggggtggtgg
 gcgcccgtga tcccagctac ttggaggcta gggcaggagc ttcaacccag gaggcagaag
 ttgcactgag ctgaaattgc accattacac tccagcctgg gcaacagagg gaggctccat
 ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaAAAagaa cttccagggg ctaattttga
 aggaaaccag gctcagagac ccagatgtgg atcctactgc tctggggcag ttaggaagag
 tgagcccacc actactgggc caaagtcagg atgatgcaag ctggaccttc agacagggtg
 ttactcgaga tcaccttcgg aacaagacat gcagccctgc acccccctgc acccccttgc
 acccttctgc atcctcctgc accaccccca catgtttccc acaccaagtt ttccttccaa
 aacctctcac tcagcccaga

  Submitted Frequency for ss16396608 back to top
There is no frequency submission for ss16396608.


  dbSNP summary of Genotypes for ss16396608 back to top
No sufficient data to compute Hardy-weinberg probability for ss16396608.


  Submitted individual genotype for ss16396608 back to top
There is no individual genotype data for ss16396608.