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Submitted SNP(ss) Details: ss20183406           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr3.NT_022517.16_57464515
RefSNP(rs#)rs12638783
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600401613422.F -123 42

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss20183406|allelePos=201|len=401|taxid=9606|alleles='C/A'|mol=Genomic
 GCACTTCATT CCCTCTCTTC GCTAGCCGGA AGTCGCGAGA TCTGAATGAG TCAAAGCCGG
 CGGCCTCGGC TCCTCAGCTC CACCTGACAG TAGGCCGCTG ATCGGCCGCG GGTCTTGTCG
 ACCGCTAGGC CACCAGGTTC ATGTGGAGGC TCCCAGGCGC CCGCGCCGCG CTTCGGGTGA
 TCCGGACGGC GGTGGAGAAG
 M
 TGAGCCGGGC TGAAGCGGGG AGCCAGACAG CGGCGGGAGC GATGGAGCGC GCTGTAGTGC
 GCTGCGTACC TTCGGAACCC AAGCTGAGCC TGTCATTCGC TTTGGCTGAT GGTAGCCACA
 AGAACATGCA GCGCGACCAG AGCGAGCCGC TGGGTCGAGT CCTCAGCCGC ATCGCTACCA
 ATGCCCTAAA GGGTCACGCT

  Submitted Frequency for ss20183406 back to top
There is no frequency submission for ss20183406.


  dbSNP summary of Genotypes for ss20183406 back to top
No sufficient data to compute Hardy-weinberg probability for ss20183406.


  Submitted individual genotype for ss20183406 back to top
There is no individual genotype data for ss20183406.

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