Submitted SNP(ss) Details: ss22989578

Submitted SNP(ss) Details: ss22989578

Submitter
Handle	BCM_SSAHASNP
Submitter SNP ID	BCM_HTWD_SNPS_200403.chr1.NT_077402.1_43906
RefSNP(rs#)	rs2531228
Submitted Batch ID	BCM_HTWD_SNPS_200403
Submitted Date	Mar 22, 2004
Publication Cited	[1] SNPs detected by comparing chromosome 16 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Mar 22 2004 12:00:00:000AM

Resource Links
GenBank Accession	NT_077402
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	BCM_HTWD_SNPS_200310
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence position quality64029836 -743 34

Fasta sequence (Legend)

 AGCCCTGAAC TGAGATTTGA CTTTACCTTG AGCTTTGTCA GTTTACGATG CTATTTCAGT
 TTTGTGCTCA GATTTGAGTG ATTGCAGGAA GAGAATAAAT TTCTTTAATG CTGTCAAGAC
 TTTAAATAGA TACAGACAGA GCATTTTCAC TTTTTCCTAC ATCTCTATTA TTCTAAAAAT
 GAGAACATTC CAAAAGTCAA
 Y
 CATCCAAGTT TATTCTAAAT AGATGTGTAG AAATAACAGT TGTTTCACAG GAGACTAATC
 GCCCAAGGAT ATGTGTTTAG AGGTACTGGT TTCTTAAATA AGGTTTTCTA GTCAGGCAAA
 AGATTCCCTG GAGCTTATGC ATCTGTGGTT GATATTTTGG GATAAGAATA AAGCTAGAAA
 TGGTGAGGCA TATTCAATTT

Submitted Frequency for ss22989578

There is no frequency submission for ss22989578.

dbSNP summary of Genotypes for ss22989578

No sufficient data to compute Hardy-weinberg probability for ss22989578.

Submitted individual genotype for ss22989578

There is no individual genotype data for ss22989578.

Disclaimer Privacy statement