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Submitted SNP(ss) Details: ss2940825005           
Submitter
HandleGNOMAD
Submitter SNP IDrs780880542
RefSNP(rs#)rs780880542
Submitted Batch IDgenome_batch_chr16
Submitted DateMay 23, 2017
Publication CitedN.D.
First entry to dbSNPMay 23 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2940825005|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 GACTTAGAAA AGGTGGAGCG CCTAT
 Y
 CAGTGGGCCG GAGCAGATCA CCCTC

  Submitted Frequency for ss2940825005 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13852C=1.00000000
T=0.00000000
gnomad-FEMALEGNOMAD
FIN3494C=1.00000000
T=0.00000000
gnomad-FINGNOMAD
NFE15000C=1.00000000
T=0.00000000
gnomad-NFEGNOMAD
ASJ302C=1.00000000
T=0.00000000
gnomad-ASJGNOMAD
EAS1622C=0.99876696
T=0.00123305
gnomad-EASGNOMAD
MALE17108C=0.99988312
T=0.00011690
gnomad-MALEGNOMAD
OTH980C=1.00000000
T=0.00000000
gnomad-OTHGNOMAD
AMR838C=1.00000000
T=0.00000000
gnomad-AMRGNOMAD
AFR8724C=1.00000000
T=0.00000000
gnomad-AFRGNOMAD


  dbSNP summary of Genotypes for ss2940825005 back to top
No sufficient data to compute Hardy-weinberg probability for ss2940825005.


  Submitted individual genotype for ss2940825005 back to top
There is no individual genotype data for ss2940825005.

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