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Submitted SNP(ss) Details: ss340887663           
Submitter
Handle1000GENOMES
Submitter SNP ID20100804_snps_12531204_chr21_14401730
RefSNP(rs#)rs2821590
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPMar 22 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize1258
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:2788

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss340887663|allelePos=51|len=101|taxid=9606|alleles='G/T'|mol=Genomic
 GGATGTCCAA TTAAATCCCA GGAAAAAAGG ACAGATTCTT GATGAAACTA
 K
 GCAAATAATG AGACAGCAAG TAAAAAGGGC TCCCCAGCAG AACCTCCGAC

  Submitted Frequency for ss340887663 back to top
There is no frequency submission for ss340887663.


  dbSNP summary of Genotypes for ss340887663 back to top
No sufficient data to compute Hardy-weinberg probability for ss340887663.


  Submitted individual genotype for ss340887663 back to top
There is no individual genotype data for ss340887663.