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Submitted SNP(ss) Details: ss4040109           
Submitter
HandleSC_JCM
Submitter SNP IDAX039612.1_15924
RefSNP(rs#)rs193303001
Submitted Batch ID21-SEP-2001f
Submitted DateSep 26, 2001
Publication Cited[1] Clone overlap SNPs detected from the public human 19-Mar-2001 draft sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPSep 26 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize6
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginG:Germline A:Germline
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AX039612.1position:15924seqversion:D38112.1position:15338seqversion:V00662.1position:15924seqversion:X93334.1position:15348seqversion:J01415.1position:15924seqversion:X62996.1position:15348

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss4040109|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 ACTCCTAGCC GCAGACCTCC TCATTCTAAC CTGAATCGGA GGACAACCAG TAAGCTACCC
 TTTTACCATC ATTGGACAAG TAGCATCCGT ACTATACTTC ACAACAATCC TAATCCTAAT
 ACCAACTATC TCCCTAATTG AAAACAAAAT ACTCAAATGG GCCTGTCCTT GTAGTATAAA
 CTAATACACC AGTCTTGTAA
 R
 CCGGAGATGA AAACCTTTTT CCAAGGACAA ATCAGAGAAA AAGTCTTTAA CTCCACCATT
 AGCACCCAAA GCTAAGATTC TAATTTAAAC TATTCTCTGT TCTTTCATGG GGAAGCAGAT
 TTGGGTACCA CCCAAGTATT GACTCACCCA TCAACAACCG CTATGTATTT CGTACATTAC
 TGCCAGCCAC CATGAATATT

  Submitted Frequency for ss4040109 back to top
There is no frequency submission for ss4040109.


  dbSNP summary of Genotypes for ss4040109 back to top
No sufficient data to compute Hardy-weinberg probability for ss4040109.


  Submitted individual genotype for ss4040109 back to top
There is no individual genotype data for ss4040109.

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