NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss618058           
Submitter
HandleSC_JCM
Submitter SNP IDAL163202.2_57089
RefSNP(rs#)rs458354
Submitted Batch ID12-JUL-2000
Submitted DateJul 12, 2000
Publication Cited[1] Clone overlap SNPs detected from the public human 24-May-2000 draft sequence
First entry to dbSNPJul 12 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AL163202.2position:57089seqversion:AC055846.2position:-15259seqversion:AC036170.2position:-50101unfin_quality:80

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss618058|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 CAAGTTTAAG GTTTTGGCAA GTGTTTGAGA AAAATATGAA TTAAGCTCAT TTTCTGTGGA
 GACAAGTCTC TAGGCGTTTA GTTTTGGTTA AGTTAAATAC TTAAATCTAT TTAAAATTTT
 AAAGACCTTA GTAATGTAAA CAAATGGTGT TGAGTTTGGA CTTCTCTACA ATATCTATGT
 GGAATCTTAG GAAAGGAAGA
 R
 TGAAAGGATA CAATACATTT TAAATGGTAG TTCAGCCTAA ATCCTAAGCA TAAGCATAAT
 ACACTGCTGC Attttttttt gacagagcct aactctgtcc cccagactga agtgcagtgg
 tgccatcttg actcactgca accccagtct cctagattca agctattctc ctgcctcagc
 ctcccaagta tctgggatca

  Submitted Frequency for ss618058 back to top
There is no frequency submission for ss618058.


  dbSNP summary of Genotypes for ss618058 back to top
No sufficient data to compute Hardy-weinberg probability for ss618058.


  Submitted individual genotype for ss618058 back to top
There is no individual genotype data for ss618058.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement