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Submitted SNP(ss) Details: ss6404826           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_004525.13_2695952
RefSNP(rs#)rs1805404
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P83591FF1.T0position:585quality:31

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6404826|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 AGGAGGTGTT GCTGAAATAA CATGGGCACC ATACGCTTGA TCTGCACATG TGGGAGAGGG
 CAAGCTGGGG GAGGTTTGCT TTGCTCTCTG AGACGAGGCC CTCCTGGGAG CTTCAGGGTG
 GGGGCTGAAT GCCCATGCTG CCCCAGTATG TACACACCTG TCACTCCTCC AGCTTCCGCT
 GTCTTCTTGA CTTTCTGCTG
 R
 TCATCCCACC GAAGCTCAGA GAACCCATCC ACCTCAACGT CAGGGTGCCG GATGGAGTGG
 CCCACCTTCC AGAAGCAGGA GAAGTGGTAC CAGTGTGGGA CTTTTCCATC AAACATGGGC
 GACTAGAAGG AAGAGAAACA GAGGGAAGTA AGTAAGCAGT TAACTTTTGA CTTAGACCCA
 CTAGACCTTG ACCTTGACCT

  Submitted Frequency for ss6404826 back to top
There is no frequency submission for ss6404826.


  dbSNP summary of Genotypes for ss6404826 back to top
No sufficient data to compute Hardy-weinberg probability for ss6404826.


  Submitted individual genotype for ss6404826 back to top
There is no individual genotype data for ss6404826.

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