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Submitted SNP(ss) Details: ss87174444           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0002820
RefSNP(rs#)rs9424288
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=A|Alt=C|Chr=chr1|Position=3727599|Strand=+|dbSNP=+|Score=42|Reads=2:2:5

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87174444|allelePos=251|len=501|taxid=9606|alleles='A/C'|mol=Genomic
 AGGAGACACA GATGTTGGGA GAGACAAGGT TAAATAAAGC CTGCAGCTCA GAACGGGAAG
 GGGAAGTGTG TGTGCATGAG TGATGGAGCT TACTTCCCTT GATTTCTCCT GGCTGTGTCC
 ACTGAGAGTC CAGCCACAGC GAACTACCCA GCAGCAGTGG GCATGAGGCC CCCAGCGCTG
 TCCTGAGACA TCCATTCCTG CTAATGGGAA CCAGGCCTCT GTGCCCAGAT GGCTGATTCC
 AGGTCCGGGG
 M
 AGGAAGGCAC CAAACAGGAG GGAGCTCTCT GAGGCTGCGT GGCTCTCATC CAGGCCTCAG
 GAGCCCAGCT GAAGAGTCTG CCATAGGCTA GAGCTGGGAT AATTCACGCA TCACTAAGCA
 TGGTAACTGC TGTGACTGGA ACACATTGAA TAATTTAAAT CCATGGTTCA TAACGACACT
 ACAGACAAAA CAAAACAAAT TAGCTGCCAT GGAAGATGCT AGTGACCCAG CTTACTATTC
 TGAAAACCAG

  Submitted Frequency for ss87174444 back to top
There is no frequency submission for ss87174444.


  dbSNP summary of Genotypes for ss87174444 back to top
No sufficient data to compute Hardy-weinberg probability for ss87174444.


  Submitted individual genotype for ss87174444 back to top
There is no individual genotype data for ss87174444.