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Submitted SNP(ss) Details: ss87562655           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0071471
RefSNP(rs#)rs1489396
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=G|Alt=A|Chr=chr1|Position=79174842|Strand=+|dbSNP=+|Score=109|Reads=5:5:7

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87562655|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 TCTTTGGAAA TATATTTATG TAGTCTCCAT CCATATTCAT ATGAGGATGA ATATGTTTCA
 TGTTATATGA ATCAAAAAAG AAAACTTTGA GAGCTGAAAC AAAACCATGA AAATAAAAAA
 AGTGAAATTA CTTTAATCAA TATACATCAT AAATATATTA GCTTAGAGAC AATTTCATCC
 ATCATTATTG TGTTTTAAAT TATTTATAAC AAGTAGAGTG AACATTCTTA ATGTGTTTGG
 ACAATGTAAT
 R
 TATATGTTAA AAATCTGACT CAAGTTTTAA TTTTTTAATT TCACTATGGC ACTCATGGTT
 TAACTTTTTT TGCATTAAAT AAAATATAAT ATGTGTATGT AACCAAGCAA GCTATAAAAT
 TATAATTACT AAAGCAAAGA TAAGCAACTA CAATGGCTTA CAGAATAGTG TCTACAACTT
 ACTAATGAGT GATTTAATTA AACGTTTGAG TGATAATTCC TTTGACCTGC TGTATTATCA
 CCATTTTCAT

  Submitted Frequency for ss87562655 back to top
There is no frequency submission for ss87562655.


  dbSNP summary of Genotypes for ss87562655 back to top
No sufficient data to compute Hardy-weinberg probability for ss87562655.


  Submitted individual genotype for ss87562655 back to top
There is no individual genotype data for ss87562655.