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Submitted SNP(ss) Details: ss1001652           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-97811
RefSNP(rs#)rs357116
Submitted Batch IDOVLP-000804-3
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC021024 SequenceAccession1:AC021024 SequenceVersion1:6 SequenceContigName1:Contig12 SequenceContigPosition1:2703 SequenceLocalName2:AC069526 SequenceAccession2:AC069526 SequenceVersion2:6 SequenceContigName2:Contig3 SequenceContigPosition2:2752 PolyBayesConfidence:97

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1001652|allelePos=101|len=201|taxid=9606|alleles='T/C'|mol=Genomic
 TGCTCACATG CGTGGGGTTC TGGGCCCCCC CGGGGCTGCT CAGCAAACCA TGGATTGGAT
 GTATCCCACT GCCCATCTGC AGAGCAAGGT GATTTATGCC
 Y
 AAGGAACATG GGATAACCAA TCCCCTTGAG GACTTTTATT AAGCACCTGC TGTATGCAGA
 CTCATTATCA ATGTGCTTGG AAACATAAGA GGAAGAATGG

  Submitted Frequency for ss1001652 back to top
There is no frequency submission for ss1001652.


  dbSNP summary of Genotypes for ss1001652 back to top
No sufficient data to compute Hardy-weinberg probability for ss1001652.


  Submitted individual genotype for ss1001652 back to top
There is no individual genotype data for ss1001652.

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