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Submitted SNP(ss) Details: ss10380474           
Submitter
HandleBCM_SSAHASNP
Submitter SNP IDchr7.NT_007819.13_24232495
RefSNP(rs#)rs131
Submitted Batch IDBaylor-WGS-200306-2
Submitted DateJun 29, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJun 29 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodBAYLOR-WGS-200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:51966775position:-470quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss10380474|allelePos=682|len=937|taxid=9606|alleles='C/G'|mol=Genomic
 TCAGATTGCT CAGAGCCCAA TCCAGCAACA GAAATGCACC TGGTGCATAT TTGAAGCGTG
 CGGCTTCCAT GAGACAAAAA GCTGGACAAT GGTATCTGGC TGTCAGTTTA GGCTGGAACC
 ATTTATTTGT CATCACTGAG TAAACAAAAC AACAAGCGCA ATAACACCAG TCATTAGAAT
 CATGGAGCCT AATAACGAAT tctagcccaa cctccggctt aaacaaagca agaactccct
 ctataacatg gctagatcat cactgcttga ccacttcctg tgacagaaac aaggcacttc
 atttcacctt tttaaaaatc tattctagac agtttgtcat catttagagc tgaaataatg
 actcactata atttcatgcg ctgctcctag atttgccctt ggtaactaca tagaacaaga
 cagaactttt ttttaaccat aacctgcact gaaaccacca ccatccccac atcccaccca
 gcaaatcttt tcttctccag actaaacagc cgcattgtca tcatcatcca tttcttatgg
 gacatggatc aagagccctt gtgatcccag atgttcaact ttgatcaccc ttcaatttgt
 gcttctctaa cagtgatgcc cagatttaaa gacaagctct aggtgtggtc tggacagagc
 agaagagaag gcaatgacaa t
 S
 ttcctggcct caaccacact gcaactgtta atactgctgg atttgcctta gctttGGGGG
 AACTTGCATC TCTTTCCAGT TCTCAGTGTT CTTACTGGGA CTGTCAGGTC ATAGGGATTT
 CTGAGAAGTT GGGCTTCCTT CTTTCTGAAG CGGACTCCTT TACTTCCTTT AACTAAAATT
 CAGGACTTGA CTGTTCTATT ATTATTACCA TCATTATAAT CATTATTAAA TTATCACATG
 TTAATTTTGA CCCAT

  Submitted Frequency for ss10380474 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
CEPH
- MULTI-NATIONAL 		184C=0.51999998
G=0.47999999
0.499 +/-0.0041_2004SEQUENOM


  dbSNP summary of Genotypes for ss10380474 back to top
No sufficient data to compute Hardy-weinberg probability for ss10380474.


  Submitted individual genotype for ss10380474 back to top
There is no individual genotype data for ss10380474.

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